Solanum stenotomum: 125860746
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Entry
125860746 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125860746
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125860746
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125860746
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125860746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_10
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125860746
NCBI-ProteinID:
XP_049396723
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Position
3:complement(23875711..23884779)
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AA seq
432 aa
AA seq
DB search
MDTSENANGSPSSPTSSNLTTFGVQFTPLRFFQSPVSTLLEYSGLFTVRPDNPETDPLVA
DDTVTTDAESSSNVGGGNSSSGEVSIRIISTGENQGIGDEYEDDGDEGGSVEERGSGVDA
SSTVPDDDAGNASRDSSYQRFDIQQVARWIEQILPFSLLLLFVFIRQHLQGFFVTIWITA
VMFKSNDILRKQTALKGERKIDVLVGYFVVFVIHVIGIYWWYHNDDLFYPLLMVPPKVIP
PFWHAIFIILVNDTMVRQAAMALKLVLLMYYKNGRGHNFRRQGQILTLVEYMLLLYRALL
PTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSIVEKVKSFYTALKALSKKEVHYGSHAT
PEQVNAAGDLCAICQEKMHAPILLRCKHLFCEDCVSEWFERERTCPLCRALVRPADLRSF
GDGSTSLYFQLF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatacttctgagaatgcaaatggttctccttcatctcccacaagttccaatttgacg
acttttggagtacaattcacaccgctccggttcttccaatcccctgtttccactttgctc
gagtattccggactctttacggttcgacccgataacccagaaacggaccctcttgtagct
gatgatactgttactaccgacgctgaatccagtagcaatgttggtggaggtaatagtagc
agtggggaggtttcaattaggataattagtactggggagaatcaagggataggggacgag
tatgaagatgatggtgatgaagggggctctgttgaggaaaggggttctggtgtggacgcg
tcgtccacggtgcctgatgatgatgctggtaatgctagtagggattcttcgtaccaaaga
tttgatatacagcaagttgctaggtggattgagcagattcttccattttcccttcttctc
ttgtttgttttcatacgccagcatttgcaaggtttctttgtcacaatttggataactgcc
gtcatgttcaagtcaaatgacattcttcggaagcagacagctttaaagggagagagaaaa
atagatgtccttgttggttattttgtggtttttgtgatacatgttattggaatctactgg
tggtatcacaatgatgaccttttctatccattactaatggttcctccgaaggtcatccca
cctttctggcatgctattttcatcatcctggtaaatgataccatggtgcggcaggcagca
atggctttgaagttggtgctgcttatgtattacaagaatggcaggggccacaactttcgt
agacagggtcaaatcctgactctggtggagtacatgctgttgttataccgtgccttgtta
ccaactcctgtatggtatagattctttctcaataaagaatatggaagccttttctcatca
ctgacaacgggattgtacttaacgtttaagcttacctccattgttgagaaggtaaaatca
ttctatactgctttgaaggcattgtcaaaaaaggaagtccattatgggtctcatgccaca
cctgagcaggtgaatgcggctggtgatctgtgcgctatttgccaggagaagatgcatgca
ccaattttgttacgttgcaaacacctcttctgtgaagactgtgtctcagaatggtttgaa
agagaaagaacatgccctctgtgcagagcattggtcagaccggctgatctaagatcgttt
ggtgatggatccactagcctttacttccagttattctag
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