Solanum stenotomum: 125860935
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Entry
125860935 CDS
T08385
Name
(RefSeq) long chain base biosynthesis protein 2b isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00600
Sphingolipid metabolism
sstn01100
Metabolic pathways
sstn04382
Cornified envelope formation
Module
sstn_M00094
Ceramide biosynthesis
sstn_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125860935
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125860935
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125860935
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
125860935
Amino acid related enzymes [BR:
sstn01007
]
Aminotransferase (transaminase)
Class II
125860935
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
125860935
NCBI-ProteinID:
XP_049396939
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All DBs
Position
3:13767300..13812749
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AA seq
489 aa
AA seq
DB search
MITIPYLTALTTYFSYGLLFAFGQFREFFRKIFDWWRGNNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPICSPPDAWFDVVERLSNDNNKTLKRTTKVSRCLNLGSYNYLGFAASDEYC
TPRVIESLKKYSASTCSARVDGGTTSIHMELEECVANFVGKPAAIVTGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEKVLREHIAEGQPRTHRPWK
KIIVIVEGIYSMEGELCQLPEIVAICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIEYLKYSCPAHLYATSISPPAAQQIISAIKVILG
EDGTSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPAKIPAFSRECLK
QNVAVVIVGFPATPLLLARARICISAAHSREDLNIALEVISKVGDLTGIKYFPAEPQKQQ
VEENRVKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccattccatacttgaccgccttgacaacctacttcagctatggattgctcttc
gcattcggtcaattccgtgagttcttcaggaagatctttgattggtggcgtggcaacaat
cttcagggatatgctccgatctgcttaggacttgaagatttctatatccgtcggttgtat
cttcgcattcaggattgctttggacggccaatatgtagtcctcctgatgcttggtttgat
gtggtggagcgtttgtccaatgataataacaagacactaaagcggaccactaaagtttca
aggtgcctaaacttgggttcatataattaccttggttttgctgcatcggatgaatattgt
acacctcgtgtcattgagtctttgaaaaagtattctgcgagcacttgcagtgcccgtgtt
gatggaggtaccacaagcatccatatggaattggaagaatgtgtggctaattttgttggc
aagccagctgctattgtcacaggcatgggttacgtaacaaattcagccatacttcctgtc
ttgatcggaaagggaggtttgattatcagtgattctctcaaccacaactctattgtaaat
ggtgctcgagggtctggagctactattcgtgtttttcaacataacacaccttctcacttg
gagaaggttttgagagaacatattgctgagggacaacccagaacacacaggccgtggaag
aagataattgttatagtggagggcatatacagcatggaaggggagctatgtcagcttcca
gagattgtcgccatatgcaagaaatacaaggcatatgtttatttggatgaggcacacagc
attggagctgttggaaaaacaggaaggggagtctgtgagctcttgggagttgacacagct
gatgtggacattatgatgggaactttcacaaaatcatttggttcatgcgggggttatatt
gctggatctaaagaacttattgaatatttgaagtattcttgcccagctcatctgtatgcc
acatcaatatcacctccagctgcccaacaaatcatttctgctatcaaggttatacttggt
gaagatggtactagtagaggagctcagaagctggctcgcattcgtgaaaatagcaatttt
ttccgatcagaactacagaagatgggttttgaggtccttggggacaatgattctcctgtg
atgcccatcatgatctacaatcctgcaaaaatacctgccttttcacgggagtgtctcaaa
cagaatgtggccgtagtgatagttggttttccagcaacccctttacttttggccagagca
cgcatatgtatttctgcagctcactcacgggaagatcttaacatagcactggaggttatc
agcaaagttggtgatctaactggaataaaatacttccctgccgagccccagaaacagcag
gtagaagaaaacagagtcaagctggaatga
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