Solanum stenotomum: 125861265
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Entry
125861265 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125861265
KO
K17925
sorting nexin-13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
125861265
Domain-containing proteins not elsewhere classified [BR:
sstn04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125861265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
AAA_lid_13
Motif
Other DBs
NCBI-GeneID:
125861265
NCBI-ProteinID:
XP_049397160
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All DBs
Position
4:11157509..11168829
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AA seq
1078 aa
AA seq
DB search
MSTERQSVTVRDLVEEAKKRVVFLIICAIGLSYLMSLTSSSVFVNLPAAALLIVSLRYLS
LDFDARMKAVTYKSKSSISNSTFQGKHIDTPRTVNEKSTWRKKVSSPAVEEAIDHFTRHI
VSEWVTDLWYSRITSDTQGPEELVQIMNGVLGEISCRMRTINLIDLITRDIINLIRTHLE
LFRASKIKIQKKRPSSLTIAELDVELKLVLAADNKLHPALFSPEAEHKVLQHLMDGLISY
TFQTEDAQCSLFHNIVRELLACVVMRPVLNIANPRFINERIESLVVSVKKGDKGNTAAET
EPQSRPVGSGKISADHFSQVLDPSAKGVELVQLKNDQPNNTEEDATNSMNGTDLLLDPLL
SFDARSTRSGSSLPSQADADDGRGIQRHHSGGEWGERLDLLSRRKTEALAPENLDNMWAK
GRNYKRKEEANLASDKLKKSSLVSAPKSSGQSKEAKQKESERENKVGAKHYVKDNAPSQG
DLKRPIYPPDYSYQEENEHSSDEVESESSSSYTTEDEEPSSVTGFDSPGTQVWDGKNIRN
VNHIHHPLENNEGHKRRKGKASKTHIRSKHLNRVLSGRKRSRLSNQTEHLWQETQRASFL
QGDGQDILNSKENVKPDGLSDDSETEIFSRISSDTNASSYVSSRSFSEIHSMGPYSTTGS
IIADSFLKLRSEVLSANIVRSGAKTFAVYSISVTDMNNNSWSIKRRFQHFEELHWRLKEF
PEYNLHLPPKHFLSSSLDVHVIRERCKSLDIYLKKLLLLPTISNSIEVWDFLSVDSQTYS
FSNSLSIIETLQADLDSTVRQKSKEPPHGISPRTVLLSSKGKHSNTESKNPTSRMEQDHA
GHEPRFRKDYVVLSPPKRPLTETFEDSNSDTLGLDFKCTCVMDFTGPVDLGFIFRRNAFW
VAKQVLQLGMGDAFDDWLIEKIQRLRRGSVVAAGIQRVEQILWPDGIFITKHPARQRPAP
SSSPNSPPGQPSTPLSSPRLEDSQKLDEMQKQEAEQRAKFVYELMIEKAPAAIVGLVGHK
EYEQCAKDLYYFIQSSVCMKQLVLDLLELLLVSAFPELTSVFNTLHEEKERFGELKID
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaagacaatcggtgactgttcgggaccttgttgaggaagctaagaagaga
gttgttttcttaatcatatgcgccattggactctcctatctaatgtctctgacgagctcc
tcagtttttgtcaacttgcctgcagctgcactcttaattgtttcccttcgttatctgtct
cttgattttgatgcgcggatgaaagctgtaacatacaaaagtaagtcatccatatcaaac
agcacttttcaggggaaacatattgatactccaagaacagttaatgagaagtccacctgg
aggaagaaagtaagttcacctgctgtcgaagaagcaatagatcacttcaccaggcatata
gtttctgaatgggtcacagatctctggtactcccgcataacttctgatacacagggtcct
gaggaacttgtgcagatcatgaatggtgtactaggggaaatttcatgtcgcatgagaact
attaatcttatagatcttatcacaagagatattatcaatctaatacgcactcacttggag
ctgtttcgtgcaagcaaaataaagattcagaagaaacggccaagctccttgacaattgca
gagctagatgtggagcttaaactggtgttggctgcagacaacaaattacatcctgctttg
ttttctccggaggctgagcacaaagtactccagcatcttatggatggtctcatttcatac
acttttcagacagaggatgcacagtgctctttgttccacaacattgtcagggagcttctt
gcttgtgttgtaatgcgaccagtattaaatatagctaatccaaggttcattaacgagagg
attgagtctctagttgtttctgtaaagaagggtgataaagggaacacagcagcagaaact
gaaccacagtccaggccggttggatctggtaaaatatcagcagatcatttttctcaggtt
ttagatccttctgccaagggcgtagagcttgtacaactaaaaaatgaccaacctaataac
actgaggaggatgccacgaacagtatgaatggaacagatttgttgttggaccctttgctt
tcatttgatgctcggtctactcgttctgggagttctttgccatcacaagctgatgcagat
gacggaagaggtattcagagacaccactctggaggagagtggggtgaaaggctagatttg
ctttctcgtagaaagactgaagccctggcccctgaaaatttagacaatatgtgggcaaaa
ggcagaaactataaacggaaagaagaggccaatttagcatctgataaactcaagaagagt
tcattggtaagtgcaccaaaatcgtcgggacagtcaaaggaagctaaacagaaagagagt
gagagagaaaacaaggttggagctaagcattatgtgaaggacaatgctccctcgcaaggt
gatttgaaaagaccaatttatcctccagattactcgtatcaagaggaaaatgaacatagc
tcagatgaggttgaatcagagagcagtagttcttacactactgaagatgaagaacccagc
agtgtgactggttttgactctcctggaactcaagtgtgggatgggaaaaatataaggaat
gtcaatcacattcatcatccacttgaaaataatgaaggccataagagaagaaaaggaaaa
gctagtaaaacacatatccgctctaaacacttaaatagagtactgtctggacggaaaagg
tctagattaagcaaccaaacggaacacttgtggcaagagacacaaagagccagcttctta
cagggggatggacaagatatattaaattccaaagaaaatgtgaaaccggatggtctaagt
gatgactctgagacagaaatattcagtagaatttctagtgacactaacgcatcatcatat
gtctcgtcaagaagcttttcggaaattcatagtatgggtccttattctacaacaggttct
ataattgctgattcttttttgaaattaagaagtgaggtcctgagtgctaatatcgtaaga
agtggcgccaaaacttttgctgtttattccatatctgttacagacatgaacaataatagt
tggtctatcaaaagaaggtttcaacattttgaggagctacactggcgtcttaaggagttt
ccggagtacaatcttcatttacctcccaagcatttcctctcttcaagtctggatgttcat
gtcattcgagaacggtgcaaatcacttgacatatatttgaagaaacttctgctgctccca
actatttccaactccatcgaagtatgggacttcctcagtgtggattcacagacatatagc
ttctcaaactccttgtccataattgaaacattacaggctgacctggacagcactgtacgc
caaaagagtaaagaacctccacatggtataagccctcgaactgttctgttatcctccaag
gggaagcattctaatactgaaagcaagaatccaacttcaaggatggaacaagatcatgca
ggacatgaaccaagattcaggaaagattatgtcgtactctctcctccaaaaagacctctc
acagaaacttttgaggattcaaatagtgacactcttggacttgattttaaatgcacttgt
gtcatggacttcactggacctgttgacttggggttcatttttaggaggaatgcattctgg
gtggctaaacaggttttacaattgggaatgggtgatgcatttgatgattggctgattgag
aaaatccagcgtctgcgcaggggttcagtagttgctgcaggtatccaacgtgttgagcag
attctctggccggatggtatattcatcacaaagcacccagcacgtcaacgtcctgcacct
tcctcatcccccaattctcctccaggccagccttcaactccattatcttcgcctaggctg
gaggattcacagaaactggatgagatgcagaagcaggaagcagagcaacgtgcaaaattt
gtttatgagctaatgattgagaaggcaccagctgctattgtaggacttgttggtcacaaa
gaatacgaacaatgtgcaaaggatctttattacttcatccagtcatctgtgtgtatgaag
cagttagttcttgatcttcttgagctattactggtgtccgcattcccagagctgacttct
gtatttaacacattgcatgaggagaaggagagatttggagaactcaaaatagattaa
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