Solanum stenotomum: 125861653
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Entry
125861653 CDS
T08385
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125861653
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125861653
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125861653
NCBI-ProteinID:
XP_049397464
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Position
4:62878180..62887895
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AA seq
405 aa
AA seq
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MDLKFKLVHIALGVLLLAQKGESQNANFDITKYGANANADISEAVGKAFKEACASTSPST
IVIPKGTFQMNQVKLEGPCKGPIELQIQAILKAPSDPNAIKVGEWLTVNKLDFFTMSGGG
TLDGQGKAAWECKQSKKCTKLPNNLSFNSLTNSIIKDITTLDSKSFHVNVNQCKNLTFIN
FNVSAPANSPNTDGIHVARASSVNITESAFSTGDDCISIGDETEQLYITKVTCGPGHGIS
VGSLGGNPGEKPVVGVFVKNCTFTSTDNGVRIKTWPASHPGVVSDIHFEDIIVQNVSNPI
VIDQVYCPSGKCNKDLPSQVKISKVSIQNIKGTSRTQNAVTLLCSKGSPCEGVEVGDIDI
SYSGKEGPAKSSCENIKPNFKGKQIPAVCSAAADAPAPAAAAAAS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattcaagttggttcatattgcattaggtgtgttacttctagcacaaaaa
ggtgaatctcaaaatgctaattttgatataactaaatatggtgccaatgccaatgctgat
attagtgaggctgtggggaaagcttttaaagaagcatgtgcatcaacaagtccaagtaca
atagtgatcccaaaaggaacattccaaatgaatcaagtgaaattagaaggaccatgcaaa
ggccctattgaacttcaaattcaagccattttgaaagctccttcagaccctaatgcaatc
aaggttggtgaatggttaacagtcaacaaacttgatttcttcacaatgtctggtggtgga
acacttgatggtcaaggtaaagctgcatgggaatgcaaacagtccaaaaagtgcaccaag
cttcccaataatttgagcttcaactccctcacaaattccataatcaaggacataacaaca
ttggatagcaaatcattccatgtgaatgttaaccaatgcaagaacttaactttcattaac
ttcaacgtcagtgctccggctaatagcccgaacactgatgggatccacgtggcgagagca
agctctgtgaatatcacagagtctgctttctccacgggagatgattgcatctccattggc
gatgaaacggaacaactttacatcactaaagtcacttgtggacctggtcatggtattagt
gtgggtagccttggtggaaatcctggtgaaaagccagttgttggtgtttttgttaaaaat
tgcacttttactagcactgataatggtgttaggatcaagacatggcctgcttctcatcct
ggtgttgtatctgatatacattttgaagatatcattgtgcaaaatgttagcaatcctatt
gtcattgatcaagtttattgtccaagtggaaaatgcaacaaagatttgccttcacaagtg
aagattagcaaggtgtctatccaaaacataaaaggtacatcaagaactcaaaatgcagtc
acactactttgtagcaaaggctcaccatgtgaaggtgttgaagttggagacattgacatc
tcatatagtggtaaagaaggaccagcaaaatcaagttgtgaaaatattaagccaaatttt
aagggcaaacaaattccagctgtttgttcagctgctgctgatgctcctgctcccgccgcg
gccgccgcggcttcttaa
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