Solanum stenotomum: 125861934
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Entry
125861934 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125861934
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125861934
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125861934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125861934
NCBI-ProteinID:
XP_049397847
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All DBs
Position
1:19189734..19191188
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AA seq
427 aa
AA seq
DB search
MLDLSPQPRTKPTLKLSIHKHKTQHAFSTFIGFLLNISSLFLITLFITSLITPPFSSSNL
DKMSAFFPQSPPLPMPFTATVNGGAIPNTAMTRPIDNTAVINDQTPSSSASSSFIIVVIV
IASAIIVSASIYLILRLLSRRFHRSFRTYATADDVVSHASAAAAAEAVTGDRCLENQRSS
EDEKLLESLPLFCFRSVTGNLTGVDCAVCLSKFEPDDQLRLLPLCLHAFHSGCIDAWLVT
NQTCPLCRSPVYPTDADVLSKVLAAENNDARAGNNELRNSGSFRIEFGSVSRRRGGSDSL
GGDGQRSYSIGSFEYIVDDGYELSAGSIHQRGASECTDKESIGVPIPAPPGESIASDVSG
GGRSWLRDYVDRIASLSLSSRSVSFRSSGRFFNGSSRRSDTVVPIEDLEAGRVGEEISEL
FRWLSGV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttagatctaagtccccaacctcgaaccaaacccacattaaaactctccattcacaaa
cacaagacacaacatgccttctctacttttatcggtttcctcttaaatatctcctctctc
tttctgatcaccttatttattacctcccttattacacctccgttttcctcctcaaatcta
gacaaaatgtccgccttttttcctcagtctccgcctctcccaatgcctttcaccgccacc
gtcaacggcggagctattcccaacaccgccatgactcgacctattgataacactgccgtt
atcaatgatcaaactccttcatcatcagcatcgtcgtcgttcattatagtcgttattgtg
attgcctctgctattatcgtttctgcttctatatacctcatccttcgccttctctcccgg
cggttccaccgctccttccgtacatacgccaccgccgatgatgttgtatcgcatgcttct
gctgctgctgctgctgaggcggttaccggagaccgttgtttggagaatcaacggagttcg
gaagatgagaaattacttgaatcgttaccgcttttctgtttccgttctgttactggaaat
ttaactggcgtggattgtgctgtttgtttatcgaaatttgagccggacgatcagttacgt
ctgcttccgctgtgtttacacgcgttccacagcggttgtatagacgcgtggcttgtaaca
aaccaaacttgtcctctctgcaggtctcctgtgtatcctacggacgcagatgtgctcagt
aaagtgttagcggcggaaaacaacgacgctcgcgccgggaataatgagctacggaatagt
ggtagttttcggattgagttcggtagtgtaagtcgccgacgtggcggttccgattcactc
ggtggtgatggtcagagatcgtactcgattggctcgttcgagtatattgtggatgacggt
tacgaactttcagctggctctattcaccaaagaggtgcttctgaatgcactgacaaggaa
tcgatcggagtaccgataccggcgcctcctggagaaagcatagcttcggatgtttccggt
ggtggacggagttggcttagggactatgttgatagaatcgcttcactttctctctcatct
cgctcagtgtcatttcggagctccggaaggtttttcaacggaagtagccggcggagcgac
accgtcgttcccattgaggatttggaagctggccgggttggggaggagattagcgaattg
tttcgctggctctcaggggtatga
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