Solanum stenotomum: 125861951
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Entry
125861951 CDS
T08385
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125861951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125861951
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125861951
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
125861951
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125861951
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125861951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
PH
Ank_4
Ank_3
Ank_5
PH_11
PH_20
PH_8
ANK_LRRK2
PH_13
UCH_N
Motif
Other DBs
NCBI-GeneID:
125861951
NCBI-ProteinID:
XP_049397833
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All DBs
Position
4:14144261..14167148
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AA seq
781 aa
AA seq
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MQGGMMFARLDDSPMFRQQIQAFEEDAETLRDKCLKFYKGCRKYTEGLGEAYDKNIAFAS
SLETFGGGHNDPVAVSFGGPDMVQFAIALREIGTYKEVLRSQVEQILNDRLLHMASIDHQ
VKEARKRFDKADVAYDQVREKFLSLKKNTKLDIVVAIEEELHCARSTFEHTRFNLVGALS
SVEAKKKYEFLESVSLTMDAHLQYFKQGYELLHQMEPYINQVLAFARRARESSTHEQVVL
NEKMQEYKKEVDQESRRSLNSPHNSSTAEITQHSSRSSQKVIEAVMQSAAEGKVETIKQG
YLSKRSSNLRGDWKRRFFVLDSRGMLYYYRTLRSRSSFQGSSNPLSSHYHGGVHDEKPVA
RRTVNLLTSTIKADAEQSDLRFCFRIISPTKSYTLQAESTAEQLVWIEKITGVITSLLSS
QIPERHFSMSHSTKSRSIGSPMSQDQRTIEECSSGRDFIAKSSIRQSKSASHLPSMKVEK
PTDALKRIPGNDKCADCGAPDPDWASLNLGILICIECSGIHRKFGVHISKVRSLALDVKV
WEPSVIILFQALGNVFVNSIWEGLLHPRRNFQADEIPMRFLESHKHKQFSCKPSEDDHIS
VKEKFIHGKYAEKKFVHKVEDSRHLLSVAQQLWEGVRKNDKKTVYRLIVVYQADVNAVHG
QASLGSDCTNSLNPQSGSADLSSDGFFDGCSLLHLACQTADIGMVELLLQHGANINACDL
RGQIPLHHSFLRGRTEIAKLLLSRGADPQAVDKEGKTPFHLVQESALDDVEIIALLKVAI
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtggaatgatgtttgccaggcttgatgattcgcccatgtttcgtcagcagatc
caagcttttgaggaagatgctgaaacattgagggataaatgtctaaagttttataaagga
tgccgaaagtacacagaagggcttggggaagcatatgataaaaacatagcttttgccagt
tctcttgaaacctttggaggagggcacaatgatcctgttgctgtttcatttggaggccct
gatatggtacaatttgctatcgctctgagagaaattggaacatacaaagaagttcttcga
tcacaggtagagcaaatattaaatgatcgattactacatatggctagcattgatcatcaa
gtaaaggaagctcggaagcgttttgacaaagctgatgtagcttatgatcaggtccgcgag
aagtttctatcgttgaagaaaaatactaaactggatatagttgtagccattgaagaggaa
ctgcattgtgctaggtcgacttttgagcatacccgctttaatctggttggagctctttct
tccgttgaggccaagaagaagtatgaattcttggaatcagttagcttgacaatggatgct
catcttcagtatttcaaacaggggtatgaactgttgcatcagatggagccttatatcaat
caggtcctggcctttgcacgaagggctagagaaagttcgacacatgagcaggtagttctc
aatgaaaaaatgcaagagtataagaaggaagttgatcaagaaagcaggcggtcattaaac
agtcctcacaattcttcaactgctgaaatcacacaacattcttctagaagttcccagaaa
gtgatagaggcagtaatgcagtctgctgcagaaggaaaggtagaaactataaaacaaggg
tatctctcaaagcgttcctccaatttaagaggtgactggaagagaagattctttgttcta
gatagcagaggaatgttgtactattatcgaacgctaaggagcaggtcctcttttcaggga
tcttccaatccactctcttcacattatcatggaggtgtacatgatgaaaaacctgttgca
cgtcgcacagtgaacctactgacatcaacaataaaagcggatgcagagcaatcagatttg
agattctgcttcagaataatttcaccaacaaagagttatactttgcaggcagagagcaca
gcagaacaactggtgtggatagaaaaaataacaggagttattacctcgttactgagttcc
cagatacctgaaaggcatttctctatgagtcactctaccaaaagtaggtccataggaagt
cccatgagtcaggatcaaagaacaattgaagagtgctcatctgggagggatttcattgct
aagagttccatacgccaatccaaaagtgcatcacacctcccgagcatgaaagtagagaaa
ccaacagatgcactgaagaggatacctgggaatgataaatgtgctgattgtggtgctcct
gatccagactgggcttctttgaatcttggtattcttatatgcattgaatgttctggcatt
caccgtaaatttggtgtacatatatcaaaggtaagatccttggcacttgatgttaaagtg
tgggagccttctgtcataatcttattccaagcacttggtaatgtgttcgtgaattctatt
tgggagggtttgttgcatccaagaagaaattttcaggcagatgaaataccgatgcggttt
ttggagtcccataaacacaagcagttttcttgcaaaccgagtgaggatgatcatatttca
gtgaaggagaagttcatccatggaaagtatgcagaaaaaaaatttgttcacaaagtggaa
gacagtaggcatctgctttctgtggcacaacagttgtgggaaggtgtgcgtaaaaatgac
aagaaaactgtataccgtctcattgttgtttatcaagcagatgttaatgcagttcacggg
caagcatcacttggcagtgattgtacgaactctttgaacccacaaagtggaagtgcagac
ctttcctctgatggattttttgatggctgttccctgcttcacctagcctgccaaactgct
gatattggcatggtggagctgcttctgcagcatggcgctaacataaatgcttgtgatttg
cgtggtcagatcccactgcatcatagtttcttaagaggaagaactgaaattgccaaacta
ttactttcaaggggggccgatccacaagctgttgataaggaaggcaagactcctttccac
cttgtccaggaatcagctctcgatgatgtggagatcattgccctgctgaaagttgcaata
ggatag
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