Solanum stenotomum: 125862077
Help
Entry
125862077 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125862077 isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125862077
Membrane trafficking [BR:
sstn04131
]
Protein recycling
Others
Retriever complex
125862077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125862077
NCBI-ProteinID:
XP_049398016
LinkDB
All DBs
Position
4:59949143..59984055
Genome browser
AA seq
923 aa
AA seq
DB search
MELKFRHRDYKAEEQVHSLSRVAAEAHPLSPQSPSSDQVDGTDYGRDEFFDPLRENHGKP
EDSMKGLGRTSTEIAGEPYRDIAIHFLGKEWTSYKKVLMQKFPVSKMISISSLSSSIMKT
GKGPEKPSANVHLEELDDPQRFAEEGVKYITLQEYVSRLTELKDEISRAWHASDRVTSFN
LSIKVAKLLSDTSVLQLYPTLFVLATEILDMLGDMVWERIKQKAEYTEDGTLVHLPGNFQ
ATEICAEAKETCYNWFCKVGSVRELLPRIYLELAICHCWRFLSEQPANNLPRLVMMARGI
ADPLASFYCRLYLAHCAQKLPQRDIGHLIISMNDMKTLLMNGAHVASAEKPSGALSGTRS
SKLGLMEPAIEYVMKCLFKESCEQLQIGDILMGLGLARNQSELFGNSSCVSLVLHHLLRE
LPIRIVCSNALDILHLIECSNDYSFDQCLNYKLLGLRLCENISNVNEVNLVMKKVIQVVS
QFNSLDEYLNVIDAHVDIALQKHMDSYLDSILDGIFERTLDDEIGENELSSLQSILLKLL
NHFDNLEHILRLNHFNQILSMMQGSSRTIVNMRILSIATRYSCVRDPTTIQFLFEVSRSL
HDSIDLSTIKEKENNHSAHLVSRFIHMVDYDSEVKRHLDFLVQCRGAFGSMSEVKEMIVH
SSNLLVVKATRNDISDVIFVKSCIACSEVTIPSIPSHLKQLNLYLETAEVALMAGLVSHS
DGLVDSALRCLHNVDLFEGSRIPKDIDGFQSTLCKFCSLIVMIPGNIERGVTSIPRNMFS
ILGSLSWMLPSMKAKVLCALILTVAALSQNNLLYHAIHDEVMGNDSLFYCDQQYLQGLFS
FSTVLLQSLIDTVLQEPIQAARGNLALDACNAVASSFEVCQGASEICSKLVETAKLSLSS
NNKYLQSTIKFLNNRGFLQRGES
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaatttcgacatcgagattacaaagctgaagaacaagttcactccctctct
cgtgtggcagcagaggctcatcctctctctcctcaatcaccgtcgtctgaccaggttgat
ggtacggattatggcagggacgagttctttgatccattaagggagaatcatggaaaacca
gaggattccatgaagggtttaggaagaacgtctactgaaatcgcaggtgaaccgtataga
gatattgctattcattttctgggcaaggagtggacatcttacaagaaagtcttgatgcaa
aaatttcctgtctccaaaatgatctctatttcttcgctgtcaagctcaattatgaagaca
ggcaagggccctgagaaaccctcagcaaatgtacatctagaggagctagatgatcctcag
agatttgctgaagaaggtgttaaatatatcaccctgcaggagtatgtctcacgcttaact
gaacttaaagatgaaattagtcgtgcctggcatgcaagtgaccgcgtaacctcctttaat
ttgtcaatcaaggttgctaagttactgtcggacacatctgtactacaattgtatccaaca
ctttttgttctagctacagaaatactagatatgttaggggatatggtatgggaacgcatc
aagcagaaagctgaatacactgaagatgggacattagtccatttaccaggtaactttcaa
gcaactgaaatctgtgctgaagccaaagaaacctgctataactggttttgcaaagttggt
tccgtccgcgagctactgccacgcatatacttggagctggccatatgccattgctggcgt
ttcctttcggaacaacctgcaaataatcttccacgactagttatgatggcaagaggcatt
gcagatccactagcatcgttttattgccgcttatatttggcccattgtgcacaaaaattg
cctcaacgggacatagggcatctgataatttctatgaatgacatgaaaacgcttctgatg
aatggtgcacacgttgcatctgcggagaaaccgtctggagctctatcaggaactcgaagt
tcaaaactgggcctgatggaaccagctatagaatatgttatgaaatgcttgttcaaggag
tcatgtgagcagttgcaaatcggagacatattgatggggcttggacttgcgaggaatcaa
tctgagttatttggaaactcatcatgcgtctcgcttgttctccaccatttattaagggaa
cttcctataagaatagtttgttctaatgccttggacattcttcatctcattgagtgtagc
aacgattactccttcgatcagtgtttgaattataagttactgggactcagactatgcgaa
aacatatctaatgtgaatgaagtcaatcttgtgatgaagaaggttatccaggttgtttct
cagtttaatagccttgatgagtacctcaatgttatagacgctcatgtagatatcgctctc
cagaaacacatggatagttatctggacagcatattagatggaatatttgagcgcacatta
gatgatgagattggtgagaatgaactatcaagcctgcaatcaattcttctgaagcttcta
aatcattttgataaccttgagcacatattgcgattgaatcatttcaatcaaatattaagc
atgatgcaggggagttctaggaccatcgtcaatatgcggatccttagtattgctacaagg
tattcttgtgttagagatcctacaactattcaattcctttttgaagtttcaaggtccttg
catgatagcatagatctctcaactattaaggaaaaggagaacaaccattcagcacattta
gtttctcgttttatacacatggttgattatgattctgaagttaaacgccacttagatttt
ttggttcagtgccgtggagcttttggaagcatgagtgaagtcaaggaaatgattgttcat
tccagcaatttactggtggttaaagctacacggaatgacattagtgatgtcatttttgtc
aaatcttgtatagcatgcagtgaagttacaataccatctatcccatctcatctgaaacag
ttaaacctctacttggaaactgcagaggttgcattaatggctggtttagtttctcactca
gatggacttgtagattcagcattgcggtgcttgcataatgttgacttatttgaaggctca
aggattcccaaggacattgatgggtttcaatcaacattatgcaaattttgcagtcttatt
gttatgattccaggtaacattgagcgaggagtcactagcatccccaggaatatgttttcc
atcctcggctccttgtcatggatgcttccaagtatgaaggcaaaggtgttatgtgcactc
atcttaacagttgctgcattgtcccagaataatctcctgtaccatgcaatacatgatgag
gttatgggcaatgactctttgttctattgtgatcaacaatatctgcaagggcttttttca
ttttctactgttcttcttcagagcttaatcgacactgttttacaagaaccaatacaggct
gcccgaggaaatctcgcacttgatgcttgcaatgctgttgcatcttcttttgaagtatgt
caaggagcatcagaaatttgctccaagctggtcgaaactgccaagctatctttgagctct
aacaacaaatatcttcaatctacaatcaagtttctcaacaaccgtggatttttgcaaaga
ggagagtcgtaa
DBGET
integrated database retrieval system
