Solanum stenotomum: 125862092
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Entry
125862092 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125862092
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125862092
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125862092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
RING_XB3-XBAT31
zf_RING_Vps8_fungal
zf-Nse
zf-C3H2C3
zf-HC5HC2H
MARVEL
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125862092
NCBI-ProteinID:
XP_049398043
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All DBs
Position
4:complement(64539608..64541184)
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AA seq
370 aa
AA seq
DB search
MSNSDRRSNHIAIILVITILQFLLLNIVKANDYNTFQELPSTQDETNNFRPSIAVVIGIL
SIMFSLTFLLLLYAKFCRRSPLALHNAMQIDQDGLTTLPMARVSSGIDKTIIESLPFFRF
SLLKGSRQGLECAVCLSRFEDVEVLRLLPKCKHAFHTKCIDQWLEKHSSCPLCRHKVCIE
DNSLLTYSNSFRFLRNDSNLELYVQREENCGSMSFKKNEDSFFDKTEEKQNIIDDDHHDM
LHKFNHKIVVSDVVLKHRWSNVSSSDFMFLNTEMINDMTNNRFNSSLESRNYNNNIVSTS
NVLRQNEKRSMSEILICPRFDDFNTRNCNRDNSITCVEEKRMKLWLPIARRTVQWFENRE
KRYARQSFNV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcagacagaagaagtaaccatatcgcgattatactagtcataacaatcctt
caatttctactcctaaatattgttaaagccaatgactacaacacatttcaagaattgcca
tcaacacaagatgaaacaaacaatttcaggccaagtatagctgttgttattggtattctc
tccatcatgttttccctaacattccttctacttctctacgccaaattctgtcgtagatcg
cctctagctctccacaacgcgatgcaaattgatcaagatggactaacaacgctcccaatg
gcacgagtttcctcaggtatagataaaactatcatagaatcactcccttttttcagattc
tctttgcttaaaggctcaagacaaggcttagaatgcgctgtttgtttatcaagattcgaa
gatgttgaagtccttcgattactaccaaaatgcaaacatgcatttcacacaaaatgtatt
gatcaatggcttgaaaaacattcaagttgtcctctatgcagacataaagtctgcattgag
gacaactcattgttaacatattcaaatagttttcgatttttaagaaatgattccaatttg
gaactttatgtacaaagagaagaaaattgtggcagcatgagtttcaagaaaaacgaagat
agttttttcgataaaacagaggaaaaacagaacataattgatgatgatcatcatgatatg
ttgcacaagttcaatcataagattgttgtgtctgatgttgtgttgaaacatcgatggagt
aacgttagttcttcggatttcatgttcttgaatactgaaatgatcaatgacatgacgaac
aatagattcaactcatcattagaatcaagaaattacaacaataatattgtaagtacatca
aatgtgttgagacaaaatgagaagagaagtatgtctgagattttgatatgtccaagattt
gatgatttcaatactaggaattgtaatagagacaattctattacttgtgttgaggaaaaa
aggatgaaactttggcttccaattgcaagaagaacagttcaatggtttgaaaatagggaa
aaaaggtatgcaagacaatcattcaatgtatag
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