KEGG   Solanum stenotomum: 125862222
Entry
125862222         CDS       T08385                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sstn  Solanum stenotomum
Pathway
sstn03010  Ribosome
sstn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    125862222
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125862222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sstn03011]
    125862222
   04121 Ubiquitin system [BR:sstn04121]
    125862222
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sstn04147]
    125862222
Ribosome [BR:sstn03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    125862222
  Archaea
    125862222
Ubiquitin system [BR:sstn04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   125862222
Exosome [BR:sstn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125862222
  Exosomal proteins of colorectal cancer cells
   125862222
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 UBL_UBAC1 Fer2_3 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 125862222
NCBI-ProteinID: XP_049398207
LinkDB
Position
4:complement(429527..431860)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctaacgggcaagactattaccttagaggtagagtcatcg
gacaccattgacaatgttaaggctaagattcaggacaaggaaggcattccaccagaccag
cagaggttgattttcgcaggaaagcagctcgaggatggccgaacgctagctgactacaac
atccagaaggagtccactctccaccttgtccttcgtctccgtggtggtgccaagaagcgt
aagaagaagacttacactaagcctaagaagatcaagcacaagaagaagaaggttaagctt
gctgtcctccagttttacaaggttgatgattctggcaaggttcagagactccgtaaggag
tgccccaacgctgagtgtggcgctggaaccttcatggctaaccattttgataggcactat
tgtggtaaatgtgggcttacctatgtttaccagaaggctggtggtgattag

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