Solanum stenotomum: 125862294
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Entry
125862294 CDS
T08385
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sstn
Solanum stenotomum
Pathway
sstn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125862294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125862294
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
125862294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
125862294
NCBI-ProteinID:
XP_049398298
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All DBs
Position
1:14363563..14367319
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AA seq
674 aa
AA seq
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MKSATAMEEEKEKMVVAGLIDKATNSTRPEVEPRLLKSIKSVVRSSDSELRLAAQTLISL
MKRDHSQVRYLALLIIDELFMRSKIFRTIVVENLDQLLTLSVGFRRNLPLPPPASVASVL
RPKAIEFLEKWNSSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIRQERREREMRTKE
ILLKKFETLKENLASIKDEIQSTVDEIGECLNILSTKDEEDILLPSLDDEDIVEFRNSEL
RQIRLDSLKEGEKIKVDSENEVVFDALRELFKVLVTNHMATVQEWISVLIRVETTDTRFR
DSTLKDLIDIRNHLKSVKKKCEESGCTLPKTRSVEDEDIWEEGNVEPENGKLFKMPDQGE
DCSLNLNFNGMRVEAPECSNLSLKGKEKLQEANGGSETDTSRGKLLAEAPVMKWGSFLDD
WGSSRRDVLANQRGLDLDGHWGRVDHDAVIPAEKIAELKVHATVYREDPIEIQPCRAPLR
NGELCQRRDLKICPFHGPIITRDDEGKPIDTGSSIEDQAAQLVDQQEPINACPSVAEKIH
DLDDKLVEKLAKQAVKNVRQRDREETKKREQDKQILKRAKLAKVREHNQEVLRDAALAST
SRSLHAGEEQDRSSLSKSLSTSKKETLASMLKKKETAKDRLGQRLLNARARDATVRQLTV
AEDSNYREAFPNQW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggcaacggcgatggaggaggaaaaagagaaaatggtggtagcagggttaatt
gataaagccaccaactccaccagaccggaagtggagccccgacttctcaaatccatcaaa
tcggtggtccgttcctctgattccgagctcagacttgctgcgcaaaccctaatttccctc
atgaaacgtgaccactctcaggtacgatatctcgctcttctcataatagatgaactcttc
atgcgctcaaagatttttagaactattgttgtcgagaacttggatcagttactcacatta
agtgttgggttcagaaggaatctgccgcttccgcctcctgcctctgttgcttctgtatta
cgccccaaagcaattgagttcttagagaagtggaattcttcatttggtattcattatagg
cagctcaggctggggtatgactatttgaagaacaccctccgctttcaatttccaaacttg
caagcaaatgcagctaggattcggcaggaaaggagggaaagagagatgaggacaaaggag
atcctgctgaagaagtttgaaaccttgaaggagaaccttgcttctataaaagatgaaatt
cagtcaacagttgatgaaattggtgagtgtttgaacattttaagcacaaaggacgaagaa
gatatattgttgccttctttagatgatgaagatattgtggagttccgtaactctgaactc
cgacaaatccgtcttgattccttgaaggagggggaaaagattaaagttgacagtgagaac
gaagttgtatttgatgcattgagggaactattcaaggtcctagtaacaaaccatatggcc
acagtgcaagaatggatctctgttctcataagagtggaaacaacagacactaggttcagg
gactccacattaaaggatctcattgatattcgtaatcatctcaaatcagtgaagaaaaaa
tgtgaagaatctggttgtactctgcctaaaactagaagtgtcgaggatgaagacatatgg
gaagagggtaatgtggaaccagaaaatggaaaattgtttaaaatgcctgaccaaggtgag
gattgctccttgaatctgaattttaatggaatgagagttgaagctcctgaatgtagtaat
ctcagtcttaagggaaaggagaagttgcaggaggccaatggtggcagtgaaactgacacc
tctagaggcaagcttttagctgaagctcccgttatgaagtggggttctttcctggatgat
tggggatcaagccgcagggatgttttggcgaaccaaagaggattagatcttgacggccac
tggggtagggtggaccatgatgcggtgattcctgctgaaaaaattgcagaattaaaagtc
catgcaactgtttatagggaagaccccattgaaatccaaccatgtcgagcccctttgaga
aatggagaactttgtcagaggagagatttgaaaatttgtccatttcatggacctattatt
actcgagatgacgaaggcaaaccaattgatacaggctcatcaatagaagatcaggctgca
cagttggtggatcagcaagagcccatcaatgcatgcccttcagtagcggagaaaatacat
gatttggatgataaacttgtggaaaaattagccaagcaggctgtaaaaaatgtccgacaa
agagatagagaggagacaaagaagagagagcaggacaaacagattttgaagcgggcaaag
cttgccaaagttcgagaacataatcaagaagttctacgtgatgctgcactggcatccacc
tcaagatccttacatgctggagaagagcaggatagatcgtctttatctaaatctttgtcc
acgagtaagaaagaaactctggcatctatgttaaaaaagaaagaaactgccaaagataga
ttgggtcaaaggcttcttaatgcccgtgctagagatgcaacagtacgacagttaacagtg
gctgaggattcaaattaccgtgaagcctttccaaatcagtggtaa
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