Solanum stenotomum: 125862399
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Entry
125862399 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125862399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125862399
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125862399
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125862399
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
125862399
NCBI-ProteinID:
XP_049398411
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All DBs
Position
1:14369333..14372943
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AA seq
336 aa
AA seq
DB search
MEFDSIECVSSSDGIEEDEIPQLHPHIIRSQFSSSKTTTHKNNINNNGSTILCDGNNGGI
AIHPATSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLA
LEKVAESLELPCKFGSLGCPEIFPYYSKLKHEAACNFRPYNCPYAGSECAAVGDIPYLVT
HLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVY
MAFLRFMGDETDAQNYTYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLVIQRNMAL
FFSGGDRKELKLRVTGRIWKEQQNPDEGACIPNLCS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatagcattgaatgtgtatcatcttctgatggtatagaggaagatgagatt
ccacaacttcatccacatatcattcgttctcagttttcgtcctcaaagacgacgacccac
aagaacaacatcaacaacaacggaagcactatcttgtgtgatggaaataatgggggaatt
gcaattcatccggcgactagcgttcatgagcttcttgaatgccctgtttgtaccaattct
atgtaccctccaatccatcagtgtcataatgggcacactatctgttcaacatgtaaagcc
agagtgcacaaccgatgtcccacttgtagacaggagcttggtgatatcagatgtttagca
ttggaaaaggtggctgaatcacttgagctaccttgcaaatttggctctcttggatgtcct
gagatatttccttattacagtaagctgaaacatgaggcagcctgtaattttagaccatac
aactgcccctatgctgggtcagagtgtgcagctgttggtgatattccttatttggttact
catttgagagatgatcacaaggtagacatgcactctggatgcacttttaaccatcgctat
gtcaaatctaatccccgagaagtggaaaatgctacatggatgttaacagttttcaattgt
tttggtcagtacttctgtctccattttgaagcatttcagcttggaatggctcctgtttac
atggcgttccttcggtttatgggagatgagacagatgcacaaaattacacctacagcctg
gaagtagggggaaacggaaggaagcttatctgggagggtacaccccgaagcataagagac
agtcataggaaagttagggatagccatgatggtctcgtcatacaacgtaacatggccctt
tttttctcgggaggggacagaaaggagctcaagctacgggtgactggaagaatatggaag
gaacaacagaatccagacgaaggagcatgcataccaaacctctgtagttaa
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