Solanum stenotomum: 125862466
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Entry
125862466 CDS
T08385
Name
(RefSeq) nuclear pore complex protein NUP54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125862466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125862466
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125862466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
DUF3181
Motif
Other DBs
NCBI-GeneID:
125862466
NCBI-ProteinID:
XP_049398503
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Position
4:complement(35439403..35457430)
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AA seq
376 aa
AA seq
DB search
MFGAQPSSAFGTPSFGTPSSTPSFGTPSSTPAFGTPSTSSFGNGFGSALFSTPFSQQSQP
QPQPQPHQQQQTSLFQTPQSSSPFSFSTPLSTATQAQSSPFGSSFPFANAQLTTQMAPVA
PLPFSLADRDIQAIVDAYKEEPGNPKYAFKHLLSSVTEPQYRTKPAGVSDIMWAEAMGKL
EGMESTDRERLWPQLVHGFKDLSQRLKLQDEVIVSDAERLQMTQNNVKMLQRHFQADTLP
WIERMRHKEQGLQRRLLRVMRILEALEGKGCRLPLMKGEAELAEKLAAILRQLKGSGAEL
SRRVQNLLTICRVQNGLGGGSVYLPGSTKIHEQSLTDMQEVLQQQTEAIGRLGNVLKRDI
RDVEIIMAEETEMMEG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccctcctccgccttcggtactccatcattcggcacaccttcgtca
accccatcattcggcacaccttcgtcaaccccagcattcggcacgccgtcaacttcatca
tttggcaatggttttggatcggcactattttcaacaccattttcacagcagtcacagcca
cagccacagccacagccacatcaacagcaacaaacttccttatttcaaacacctcagagt
tcgtcccctttcagcttttccacacccttgagtactgctacacaggcccaatccagtcca
tttggtagttcctttccatttgcaaatgctcagttgactactcagatggctcccgtggct
ccactccccttttctctcgctgatagggatatacaagcaattgttgatgcgtacaaggag
gagcctggtaaccctaaatatgctttcaagcatcttttgtccagtgtgacggaacctcaa
tataggacgaaacctgcaggggtatctgatataatgtgggcagaggcaatgggcaaactt
gaaggcatggagagtactgaccgtgagcgcctgtggcctcaacttgttcacggcttcaag
gatctttcccaacggctcaagcttcaagatgaagtcatagtttcagatgctgagaggctg
caaatgacgcagaacaatgtgaaaatgttgcaaaggcatttccaagctgatacccttcct
tggattgaaagaatgagacacaaagagcaaggtcttcaaagacgccttttgagggtgatg
agaatactagaggcacttgaaggtaaaggttgtcgattgcctttgatgaaaggagaagct
gaattggcagagaagttggcagccatcttgagacagttaaaaggttctggagcagaactt
tctaggagggttcagaatctgctcaccatatgtcgtgttcaaaatggccttggaggtggt
tctgtttatctccctggttcaaccaagatccatgagcagagtcttactgacatgcaggag
gttttgcaacaacaaaccgaggctattggtaggcttggcaatgtattgaagcgagatatc
cgagatgtggagatcataatggccgaggaaacagaaatgatggaaggctga
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