Solanum stenotomum: 125862510
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Entry
125862510 CDS
T08385
Name
(RefSeq) myosin-12 isoform X1
KO
K10357
myosin V
Organism
sstn
Solanum stenotomum
Pathway
sstn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125862510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125862510
04131 Membrane trafficking [BR:
sstn04131
]
125862510
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125862510
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sstn04812
]
125862510
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125862510
mRNA cycle factors
P-body specific factors
125862510
Membrane trafficking [BR:
sstn04131
]
Others
Actin-binding proteins
Myosins
125862510
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125862510
Cytoskeleton proteins [BR:
sstn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125862510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
KASH_CCD
AAA_22
nSTAND3
TSC22
AAA_16
AAA_6
Pox_A_type_inc
DUF1664
Asp_aminotransf
GIT_CC
CbiA
COG6_N
Motif
Other DBs
NCBI-GeneID:
125862510
NCBI-ProteinID:
XP_049398563
LinkDB
All DBs
Position
1:complement(20361692..20374507)
Genome browser
AA seq
1571 aa
AA seq
DB search
MGTPVNIIVGSQVWIEDPDDAWIDGEVTEIKGSNATVATTNGKTTVASISSIYPKDTEAP
PSGVDDMTKLAYLHEPGVLNNLACRYSLNEIYTYTGNILIAVNPFRRLPHLYDTHMMQQY
KGAPFGELSPHLFAVADACYRALINEHGNQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKHAKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDVKRFKLGNPKTFHYLNQSSCYEVANVDDAREYL
ETRNAMDVVGIGQEEQEAIFRVVAAILHLGNINFVKGKEADSSKLKDEKSLFHLKTAAEL
FMCDEKALEDSLCKRVIVTPDGNITKLLDPAAATTSRDALAKTVYSRLFDWLVDKINNSI
GQDPEAKSIIGVLDIYGFESFKINSFEQFCINLTNEKLQQHFNQHVFKMEQDDYTTEEIN
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKATHETFAQKMYQTYRAHKRFSKPKL
ARTDFTINHYAGDVTYQADHFLDKNKDYVIAEFQALLMDSKCFFVANLFPPLPEESSKQS
KFSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENMNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFLDRFGTLAPDVLDGCDEKSACIAICDRMGLKGYQIGKTKVFLRA
GQMAELDARRTEVLAHAAKRIQRQIRTYLTRKEFIALKRATIHFQKLWRAQLARVLYEQM
KREAASIRIQKHARSHSARKSYKELQAAAVVIQTGMRAMAARNEYRQRRRNKAAKIVQTQ
WRGFHAFSTYKQKKKASLSLQCLWRGRLARKVLRKLRMDARDTGALKEAKDKLEKRVEEL
TWRLDFEKHLRIDLEEAKGQEISKLQKALQEMQTQLDEAHDAIIHEKEAAKIAIEQAPPV
IKEVPVIDNTKVEKLTEENNKLEEEIRELKKRVEDFEQSYNEVEKECQATRKEAEESQLR
VSEFQESIERLQLNLSNLESENQVLRQQALVASTNEALSDEMDILKNKIKDLESENELLR
TQRVVVEQVVSSDDRAPKGLETVDITHPADNEHQTEEVHEEMKVEQQIPKLLQDSSPPIS
LIKQRSLTDRQQENHDILIKCLAEDKRFDKGRPVAACTLYKALLQWRSFEAEKTNIFDRI
IHTIRSSIEDQDNTGDLAYWLSTSSTLLFLLQSTIKAGNAPTRSPYRNRSSPTTLFGRMA
QQGFRSTSLSMAISSGYSGIEGSPNVRTRIEAKYPALLFKQHLTACVEKIYGMIRDNLKK
EISPFLNQCIHAPRSARIKPLKGSSRSIHSNIIAKQQASSIHWQNIVNSLDNTLTILSEN
NVPSTITRKILSQVFSYINVQLFNSLLLRRECCSFSNGEYLKAGLQELESWCSKATEQYA
GSSWDELQHIRQAVGFLVLHQKSQKALDEITNDLCPMLSIAQIYRIGTMFWDDKYGAHGL
SPEVISKMRALTLEDSASIPNNTFLLDVDSSIPFSIEEISRSFQNINLSDVEPPPLLCQR
SDFQFLLQAAA
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcctgtaaacatcatagttggatcccaggtgtggattgaggatcctgatgat
gcctggattgatggagaagtcacagaaattaaaggctcaaatgccacagtagccacaact
aatgggaagacgacagttgcttctatttctagcatatacccaaaggataccgaagcacca
ccatctggggttgatgacatgaccaagttagcttatctccatgagcctggcgttctgaat
aaccttgcttgtcggtattctctaaatgagatatatacttacacggggaatatcctaatt
gcggtcaatccatttcggagacttccacatctgtatgatacccatatgatgcagcaatac
aagggagccccatttggagagctaagtccacatctttttgcagtggcagatgcctgttat
agggcattgataaatgagcatggcaaccagtctatcttggtcagtggagagagtggtgct
ggtaaaactgagacaacgaaaatgttaatgagatatctcgcgtttatgggtggaaggtct
ggcactgaaggaagaacagtcgagcaacaagttttggagtccaacccagttttagaagca
tttgggaatgcaaagactgtgaagaacaacaattccagtcgctttggtaaatttgttgaa
attcagtttgataagcacgcgaagatttctggggctgcagttaggacatatcttcttgaa
aggtcacgtgtttgccaagtctcagacccagagagaaactaccattgtttttacatgctt
tgtgctgcaccaccagaggatgtgaaaagattcaaacttgggaatccaaaaacatttcat
tatctaaaccaaagtagctgttatgaagttgcaaatgttgacgatgcaagagagtatctt
gaaaccagaaatgctatggatgttgttggaatcggtcaggaggagcaggaagctatattt
cgtgttgtagctgcaatactccatctcggaaacatcaactttgtcaaaggaaaggaggca
gattcctccaaactaaaagatgagaagtcactttttcatctgaagacagctgcagagcta
ttcatgtgtgatgagaaggcactagaggactcactttgtaagcgtgtcattgtaactcct
gatggaaacatcacaaaactactggatccagcagctgcaaccacgagcagggatgccctg
gcaaagaccgtatactccagattgtttgactggcttgtggacaagataaacaattcaatt
ggacaggatcctgaagcaaaaagcataattggcgtccttgatatatatggctttgagagc
ttcaaaatcaacagttttgagcaattctgcatcaacctaacaaatgagaagttgcagcag
cattttaaccagcacgtattcaagatggaacaagacgactatacgacagaagaaatcaac
tggagttatgtggagtttgtagataaccaagatgttttagatcttattgagaagaaacct
ggaggcattattgctcttcttgatgaagcttgtatgttcccaaaagcaactcatgagaca
tttgcccaaaagatgtaccagacatacagagcccataaacggtttagcaagccaaaactt
gctcgtactgactttacaatcaatcattacgctggtgatgttacttaccaagcagatcac
ttccttgacaaaaataaggactatgtgatagcagaatttcaagctcttctgatggactca
aagtgctttttcgttgcaaacctcttccctccattgcccgaagaatcgtccaagcagtcc
aagttctcatccatcggcacacggtttaagcaacaactgcaatctttaatggagaccttg
agcactacagagccacattacatcagatgtgtaaagcccaatacagttctaaagccagga
atatttgagaacatgaatgtattaaaccaattaagatgtgggggtgtcttagaggcgatc
aggataagttgtgcaggatacccaacgaaaagaacattcgatgagttccttgaccgcttt
ggaacgttagctccagatgttcttgacggatgtgatgagaagtcagcatgcattgcaatt
tgtgatagaatgggcttaaagggttatcagattgggaaaaccaaagtttttctcagagcc
gggcagatggctgaattagatgccagaagaacagaagttctagctcatgctgcaaagcgc
attcagagacaaattcgaacatatcttacccgaaaggagttcatagccctaaagagagct
acaattcatttccagaaactttggagagcacaacttgccagagtgctatatgaacaaatg
aaaagggaagctgcttcaatccgcatacagaaacatgcgcgttctcattcagcaagaaaa
tcttacaaggaattacaggcagcagctgtagtcattcaaacagggatgagagctatggca
gcacgaaatgaatataggcagaggaggagaaataaagcagctaaaatagttcagactcaa
tggagaggattccatgccttctcaacttataaacagaagaaaaaagcaagtctttcactt
caatgtctctggagaggcaggttagcgaggaaggtgcttcggaaattgaggatggatgca
agagatactggggcacttaaagaagcaaaggataaactggaaaagcgtgtcgaggagtta
acatggcgattagattttgaaaaacacttgaggattgatctcgaagaagcaaaggggcaa
gaaatttcaaaattgcaaaaagccttacaagaaatgcaaacgcaactagacgaagcccat
gatgcaattattcatgagaaagaagcagcaaagatagccattgaacaagctcctccagtt
atcaaggaggtaccagtgattgacaacaccaaagtggagaagctgacagaggaaaacaac
aaactcgaggaagaaatcagagagctcaagaagagagtagaagacttcgaacagagctac
aacgaagttgaaaaagaatgccaggccacacgtaaagaggcagaagaatctcagctaaga
gtttcggagttccaagagtccatagaaagattacaactgaatctatccaaccttgaatcg
gagaatcaggttctccgtcagcaggctttagtagcatcaacaaatgaggccctttctgat
gaaatggacatactcaagaacaagattaaagacttggagtcagaaaacgagcttctccgc
actcaaagggtagttgtggagcaagtagtaagttctgatgatcgggcacctaaagggctt
gagaccgttgatatcacacatccagctgataatgaacatcaaacagaggaagtgcatgaa
gaaatgaaagtagaacaacaaatacctaagcttctgcaggattctagccctcccatctct
ttaattaagcaaagatccttgacagataggcagcaggaaaaccatgatatactgataaag
tgccttgcggaagacaagcgatttgacaagggaagaccagtagctgcatgcaccctgtac
aaagcacttctgcagtggagatcctttgaagcagaaaaaacgaatatatttgataggatt
attcataccatccgatcatctatagaggatcaggataacaccggtgatctagcctactgg
ctgtcaacatcttcaactctgttgttccttttgcaaagcacaattaaagctggtaatgca
cctactaggtccccatatcgtaatcgcagctcaccaaccacattgtttggaagaatggca
cagcagggttttcgttcaacttcattaagcatggcaatttccagtggatacagcggaatt
gagggaagcccaaatgtccgaacaaggattgaagctaaatacccagcactattgtttaag
caacacctaactgcttgtgttgagaaaatatatggaatgatccgcgacaacttaaagaaa
gaaataagtccatttcttaaccaatgcatacatgcaccaagatctgcaaggataaaacct
ttaaaaggatcatctagaagtatacattcaaacatcatcgcgaaacaacaggcatccagc
atacactggcaaaacattgtgaatagcctagacaatacattaaccatactctcagaaaat
aatgtcccttccaccattacaaggaaaatactcagtcaggtgttctcatacataaatgtc
cagcttttcaacagcttgttgcttcgccgtgaatgctgctcatttagcaatggggaatat
ctgaaggcgggtctgcaagaactggaaagttggtgttccaaagcaacagaacagtatgct
ggatcttcgtgggatgaacttcaacacataaggcaagctgtaggatttctggtgttgcat
caaaaatctcaaaaggcattggatgagatcacgaatgacctctgcccgatgttgagcatt
gcacaaatatatcgcattggaactatgttctgggacgacaaatatggagcccatggttta
tcgccagaggtcataagcaagatgagagcactaacattggaagactcagccagcattcca
aataatacattcttgcttgatgtggattcaagcataccattctctatagaagaaatatcg
cgatccttccagaatatcaacttgtctgatgtggaaccacctcccctcctttgtcaaaga
tcagattttcagttcctgctgcaggcagcagcataa
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integrated database retrieval system
