Solanum stenotomum: 125862542
Help
Entry
125862542 CDS
T08385
Name
(RefSeq) EH domain-containing protein 1-like isoform X1
KO
K12483
EH domain-containing protein 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125862542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125862542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125862542
Membrane trafficking [BR:
sstn04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125862542
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125862542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
EF-hand_7
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_6
NPA
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
125862542
NCBI-ProteinID:
XP_049398600
LinkDB
All DBs
Position
4:complement(59668307..59675509)
Genome browser
AA seq
574 aa
AA seq
DB search
MEFDTSPINRCSKDHEKIYQQWFSLADSDGDGRLTGGDAIKFFAMSNLPRQDLKQVWAIA
DSKRQGFLGFREFIAAMQLVSLAQAGHPVSSDLLNAEVDFENLQPPSLEGLDLLQTKKKR
MPKSEPEQNGSSTVQSSATANWFSSSSSVKKVSLSSVTSIVDGLKKLYLQKLKPLEATYH
FNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLGTSYPGHLTLFFFLSMSLVCSQ
LPVDTCAPYLSIGAHIGPEPTTDRFVVVMNGPDERSIPGNTIAVQANMPFSGLTTFGSAF
LSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRSYDFTGVTSWFASKCDLILLLFDPH
KLDISDEFKRVIASLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVARV
YIGSFNDKPINEAAIGPIGKELFEKEQDDLLTDLKNIPKKACDRRINEFVKRARAAKIHS
YIISHLKKEMPAMMGKAKTQQKLIDNLEDQFMKVQKEHHLPAGDFPNVEHFREVLSGYNI
DKFEKLKPKLIQSIDDMLGYDIPELLKNFRNPYD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatacatctccgattaatcggtgctccaaagatcatgaaaaaatctatcaa
caatggtttagtttagccgattcagatggagatggacgtctcactggcggtgatgctatc
aagttctttgccatgtccaatttgcctcggcaggacctcaagcaggtgtgggcaattgca
gattccaaacggcaaggctttctcggttttagagagtttattgctgcaatgcagttagtc
tctttggcacaagctggccacccagtaagcagtgatctcttaaatgccgaagttgacttt
gaaaatttgcaaccccctagcttggaaggtctggatttacttcaaactaagaaaaagcgt
atgcctaaaagtgaacctgagcagaatggcagttctacagtgcaatcttctgctacagct
aattggttttcatcatcttcatctgtaaagaaggtctctttaagctccgtcacatcgata
gttgatggactgaagaagttgtacctccagaaactaaagccactggaagcaacatatcac
tttaatgatttcgtctctccattactgacaaatagtgattttgatgccaaaccaatggtc
atgcttttgggtcaatactcaactggaaaaactacatttattaagcatttacttggaacc
agttatccaggtcatctaacactcttttttttcttgtccatgtctcttgtttgttcacag
cttcctgttgacacttgtgctccttatttgtctataggtgctcacattggaccagagcct
acaacagacagatttgtggttgtcatgaatggacccgacgaaaggagtattccagggaac
acaattgcagttcaagcaaatatgccatttagcggtttgacaacttttggatctgcattt
ttgtcaaagtttgagtgttctcaaatgccgcatcctctgttggagcacatcacatttgtt
gatactcctggagttctatcaggagaaaaacaacgaacacaaaggagctatgattttacg
ggagtgacgtcttggtttgcatctaagtgtgatctcattcttcttttgtttgatcctcac
aaacttgatataagtgatgaattcaaacgtgtgattgcgtctcttcgaggccatgatgat
aagatacgggtggttttgaacaaggctgaccaagttgatactcaacaacttatgagggtt
tacggagcattgatgtggtctttagggaaggttctaaatacccctgaagttgcacgtgtc
tacataggatcatttaatgacaaaccaataaatgaggctgctatagggccaattggaaaa
gaactttttgagaaggaacaagatgatctccttacagacttgaaaaacataccaaagaag
gcttgtgatcgtcgtataaatgaattcgtaaaacgtgctagagctgccaagatacattct
tacattatcagtcatctgaaaaaggagatgccagcaatgatgggcaaagccaagacccag
caaaaacttattgataacttggaagatcaatttatgaaggttcaaaaggaacaccatcta
ccagctggggattttcctaacgtcgaacacttcagggaagttctgagtggttataacatt
gataagtttgagaagttgaagcccaaattgatacaatccatcgatgacatgcttggttat
gacatccctgaacttctcaagaatttcagaaatccttacgattga
DBGET
integrated database retrieval system
