Solanum stenotomum: 125862635
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Entry
125862635 CDS
T08385
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125862635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125862635
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
125862635
Transfer RNA biogenesis [BR:
sstn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125862635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
125862635
NCBI-ProteinID:
XP_049398713
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All DBs
Position
1:complement(18463905..18511446)
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AA seq
1060 aa
AA seq
DB search
MAILALPLITSILKPHKTHFSFLPLPIILHRRFFSKSSTVSALSTSSSSHVSHNSEHQKK
ASVPTFQQAIQRLQEYWGSVGCAVMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSI
RPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVNAHDIRFVEDNWES
PVLGAWGLGWEVWMDGMEITQFTYFQQAGSIQLMPVSVEITYGLERILMSLQGVDHFKKI
QYADGITYGELFLENEKEMSAYYLEHASVDHMHKHFDLFEAEARRLLDLGLAIPAYDQLL
KTSHAFNVLDSRGFVGVTERARYFGRMRSLARQCAQLWLQTREFLGHPLGVVSHSDHLIV
QREVSEEATGKVPSEPQLFVLEIGTEELPPNDVSSACKQLKDLIVQLLDKQRLLHGEVQT
HGTPRRVVVSVENLHSKQVEHEVEIRGPPVSKAFDKEGNPTKAAEGFCRRNNVPLDSMYR
RAEGKTEYVYVRLVEPARLAFKVLSEELPDIIASISFPKSMRWNSDVAFSRPIRWILALH
GGVVLPFMYAGVVSGNVSHGLRNTPSATVKILDAEAYANVMQDAGILADVEHRKKTITEK
SNDLAKSVHGHIVMKSDLLDEVVNLVEAPLPVLGKFDESFLELPKELLIMVMQKHQKYFA
MTDENGLLLPYFVTVANGSIDNKVVRKGNEAVLRARFEDAKFFYAMDTNRKFSEFRTQLK
GILFHEKLGTMLDKMTRVQNLASEVGLSLGLSEDKLKVIQDAASLAMADLATAVVTEFTS
LSGTMARHYALRDGYSKEIAEALFEILLPRFSGDILPKTEVGSVLAITDRLDSIVGLFAA
GCQPSSSNDPFGLRRISYGLVQLLVEIDRNVDLRQALELAAAVQPIEVDVSTINDVHQFV
TRRLEQFLMDKGISPEVVRSILSERARRPGLATKSVYKMESLSKGELLPKVVEAYSRPTR
IVRGKDANVDVEVDDQAFETNEEKALWNTFLSLKSKIHPDMEVDDFVEASSVLVEPLEDF
FNEVFVMVEDERVRTNRLALLKKIADLPRGIVDLSVLPGF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcttgcactcccattaattacttcaattctcaaaccccacaaaacccacttc
tcctttctccctctacccatcattcttcacaggcgtttcttttctaaatcttccactgtc
tctgcactgtccacttcttcttcttctcatgtgtctcacaattcagaacaccaaaagaaa
gcctctgttccaactttccaacaagccattcaaaggcttcaggagtattggggttctgta
ggatgtgccgtgatgcaatgcagcaatactgaggttggagctgggactatgaatcctcta
acatatttaagagttctcggaccagaaccgtggaatgttgcgtatgtagaacctagtatt
cgtccagatgatagtcgttatggagaaaatccaaataggcttcaaaggcatacccagttt
caggtgattttgaagcctgatccaggaaactcgcaggacctgttcatccgtagcttgtca
gcattaggtattgatgtcaatgcacatgatattcggtttgttgaggacaactgggagagc
cctgtgcttggtgcctggggattgggctgggaggtttggatggatggaatggaaatcaca
caattcacctacttccagcaggctggaagtattcagttgatgccagtctcagttgagatc
acttatgggcttgagcgtatccttatgtcacttcagggtgttgatcattttaaaaagatt
cagtatgcagatggcattacatatggagagctttttctggaaaatgagaaggagatgagt
gcgtattatctggagcatgctagtgttgaccatatgcataaacattttgatctttttgaa
gcagaagctcgccgtttgcttgatctaggccttgcaatacctgcgtatgatcagcttttg
aagacttctcatgcttttaacgttttagactcgagaggctttgttggggtgacagagcgt
gctcgttattttgggcgtatgcggagtttagctcgtcaatgcgcacaactttggttgcag
acaagggagtttcttggccatccactaggtgttgtctctcatagtgatcatcttattgtt
caaagagaagtctcggaggaagcaacgggaaaggtgccttcagagccacaattgtttgtt
cttgaaattgggactgaggagttgcctccaaatgatgtatcaagtgcatgcaaacaactc
aaggatctgattgttcagttactggacaaacaaaggttgcttcatggggaagtacaaaca
catggcactccacgtagagtagtggttagcgttgagaatctacactctaagcaagtggaa
catgaggtagagattcgtggacctcctgtttctaaagcttttgacaaggaaggaaatcct
accaaggctgctgaaggtttttgtcgcagaaataatgtgcctttagattccatgtacaga
cgagctgaagggaaaacagaatatgtctatgttcgtttggtggagccagcacggcttgca
ttcaaggttttgtctgaagagttacctgatataattgccagcatttcattccccaagtca
atgcgttggaactctgatgttgcattcagcagacccattcgttggattttggcccttcat
ggaggtgtagttcttccctttatgtatgctggagttgtaagtggaaatgtatctcatggt
ctacgcaatactccatcagctacagttaagatattggatgcagaagcctatgcaaatgta
atgcaggatgctgggattcttgctgatgtcgagcatcgcaagaaaacaattacagagaaa
tcaaatgatttagcaaaaagtgtacatggacatattgtaatgaagagtgatttgcttgat
gaggtcgtgaatcttgttgaggcaccactccctgtacttggcaaatttgatgagtccttc
ttagagcttccaaaggagctacttataatggtgatgcagaagcatcagaaatactttgcc
atgactgatgagaatgggttactgttgccatactttgtcacagttgcaaatggatcaatt
gataacaaggtagttagaaaaggaaatgaagctgtgctaagagctcgatttgaagatgca
aaatttttctatgcaatggacacaaatagaaaattttctgaattccgtacgcaactgaaa
gggattcttttccatgagaagcttgggactatgctagacaagatgacacgagttcagaat
ttggctagtgaagttgggttgtctcttggattaagtgaagacaaactcaaagtcatccaa
gatgcagcctcattagccatggcggatcttgcaactgcagttgttacagagttcacttct
ctttcagggacaatggcacgccactatgcacttagagatggctattcaaaggagattgca
gaggcattgtttgagatcttacttccacgattttctggagatattctcccaaaaactgaa
gttgggtctgttttggctattactgataggcttgatagcattgttggcttatttgctgct
ggctgtcagccaagctcaagtaatgatccatttggcctgcgacggatctcctacggtctt
gtgcaactcttggttgaaattgacagaaatgtggacttacgacaggctttagaacttgct
gctgcagtgcaacccattgaagttgatgtcagtacaatcaatgatgtacatcaatttgta
acgcgcagactagaacaatttctgatggacaaaggtataagcccagaagtcgttaggtct
attctttccgagcgtgcaagacgacctggtttggcgactaagtcagtgtacaaaatggag
tccttgtccaaaggggagcttttgcctaaggttgttgaagcatattcacgtccaacaaga
attgttcgcgggaaggatgccaatgttgatgtggaggtggatgatcaagcttttgaaaca
aatgaagagaaagctttgtggaacactttcttgtcactaaaaagtaaaatacatccagac
atggaagttgatgattttgttgaagcatcatcagtacttgtagaaccgctggaggatttt
ttcaacgaggtctttgtaatggtggaagacgaacgggtaagaacaaaccggcttgcactg
ctgaagaaaatagcagacttgccaaggggaatagtagatctctcagttttaccgggattt
tga
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