Solanum stenotomum: 125862704
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Entry
125862704 CDS
T08385
Name
(RefSeq) la-related protein 6B-like
KO
K15191
La-related protein 7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125862704
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
125862704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
HENMT1_C
PAM2
Motif
Other DBs
NCBI-GeneID:
125862704
NCBI-ProteinID:
XP_049398786
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All DBs
Position
4:56700734..56713286
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AA seq
475 aa
AA seq
DB search
MAMEEESSVSVDSHTASLAFNLDRPLESSSSNTSKLNAQAPAFLPRTSSGRVYATRAAPL
HQITTHVAIQNQFLYAPQMPLQSPQSPYYGGGGGVARRFVDQEVAAAATADADNSAKNGG
LTEEAAQKVVNQVEFYFSDLNLATTENLIRHMIKDPEGYVPISVVASFKKIKALIGSHAQ
LAEVLRSSINLVVSEDGKKVKRQNPLTEAALEELQSRIVVAENLPEDHCHQNLMKIFSAV
GRVKMIRTCHPQPSNGGASSASRSAKSDSTMYSNKLHAFVEYDAVELAEKAVLELNDVDN
WRNGLKVHLLLRRTAKSGQARVKKVGHESDPNSKEDDDVAFELNEKHDGDSSHHVDVQSN
DVAEEHGRVGKKKGNNRGRGKVQGQGPGQTRGRGRETPQFRQTNRGGRTGGSVTKVNTGS
SVASAPSSTGGVNVTGQPAVVADQSAGKQSSVPRMPDGTKGFSMGRGKPIAIRTE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaagaagaatcttcagtttctgtagattctcacactgcatctctcgccttc
aatctcgaccgtccattggaatcctcttcttctaataccagcaaacttaacgctcaagct
cctgctttccttcctagaacctcttctggacgcgtctatgctactcgtgctgctccgctt
catcagatcacaactcatgttgcgatacagaatcagttcctttatgcccctcaaatgcca
ctacagtctcctcagtcgccttactatggcggtggtggtggcgttgctcgaagatttgtt
gatcaagaggttgctgctgctgctactgctgatgccgataattcagctaagaatggtggg
ttaactgaagaagctgctcagaaagtcgttaatcaggtggaattctatttcagcgatcta
aatttggcaacgactgaaaatttgataaggcatatgatcaaggatcccgaggggtatgta
ccaatatcagtggttgcgtcattcaagaagattaaagctctaataggtagtcatgctcag
cttgccgaagttctgcgcagctcaataaatcttgtagttagtgaagatggaaagaaagtt
aaacggcaaaatcctctgactgaagctgccctagaggagttgcagtctcgcatagtggtt
gctgagaatttgcctgaggaccactgccaccagaacctcatgaagattttttcagcagtt
ggaagggtaaaaatgatacggacctgccaccctcagccttcaaatggtggggcttcttca
gcatctagatcagcaaaatcagacagcacaatgtatagtaacaagttgcacgcatttgtg
gagtacgacgctgtagaattggctgagaaggcggttcttgagctaaatgacgtggataat
tggcgaaatggtctaaaagtccatctgctgcttagacgcacagccaaatctggtcaagcc
cgagtgaagaaggttggtcatgaaagtgatccgaactccaaagaagatgatgatgttgca
tttgaactcaatgagaaacatgatggagactcctcccaccatgttgatgtgcagtccaat
gacgttgcagaggagcatggccgcgttgggaagaagaaagggaacaatcgtggtcggggt
aaggtacaggggcaaggaccaggacagacgaggggtcggggtcgtgaaactccccagttt
cgacaaaccaatcgtggagggcgtacagggggttctgtaacaaaagtgaatactggaagt
agtgtggctagtgccccctcgagtaccggtggtgttaatgtcacaggccagcctgcagta
gttgctgaccagtcagctggcaagcaatcttctgtgcctcgcatgccagatggcactaag
ggattctccatgggtcgagggaaaccaattgctattagaactgagtga
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