Solanum stenotomum: 125862709
Help
Entry
125862709 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase ATL9-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125862709
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125862709
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125862709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-RING_6
PSI_PsaJ
Prok-RING_4
Rtf2
PHD_NSD
BIV_Env
RINGv
Motif
Other DBs
NCBI-GeneID:
125862709
NCBI-ProteinID:
XP_049398794
LinkDB
All DBs
Position
4:complement(4797519..4798811)
Genome browser
AA seq
378 aa
AA seq
DB search
MKHKMNIFYFVLCLFCVVAKAGTTLDTPSLPPTTLTHPIDPSNVQISPTLAVILACLVLI
LFAGVFIYMRRMSPDSFDHSLGFHFLRNRPPVSRGLDPEIIKTFPVFVYSDVKSLNLGKS
ILECAVCLNEFEDEETLRLLPNCHHVFHPECIDAWLAFRTTCPVCRTNLKTKPIKPTDPQ
HENSVTDTIIDIHMTSVVGPQEVNNASPQKSIDSHNIPNCSNAKRKTPNFLSITRKSPTP
TRTNILRMFNRSHSTGHSLIQPGQNCERFTLKLPEDARKRLMELSSSRAYNNGEVLSLER
STSSKGYRFEPGNGRFKFLSTPNLLSNKPGSPKEERSEKEPKNLLRSVKSPLSLLCVTEK
EEEMGERSFTYLRSNPSS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataagatgaatatattttatttcgtcttatgccttttttgcgtagtagcaaaa
gctggtacaaccttagacacaccatcattacctccaacaacgttaacgcacccgatagac
ccctcaaatgttcaaatcagtccaacgttagcggttatacttgcttgtctcgtattaatc
ctattcgcaggtgtcttcatatatatgcgtcgtatgagccccgattccttcgatcattca
ttaggatttcatttcctacgaaatcgtcctcctgttagccgaggactcgaccccgagatc
attaaaacattcccagtattcgtctattcagatgtcaaatcattaaatttgggcaaatcc
atcttagaatgcgcggtttgtttaaacgaattcgaagatgaagaaactctccgtctccta
ccaaattgtcatcatgtttttcatcctgaatgtattgatgcttggctcgccttccgaacc
acttgccccgtctgccgaaccaatctcaaaaccaaaccaattaaaccaaccgatcctcaa
catgaaaattcagttactgacacaatcattgatattcacatgacaagtgtggtgggtcca
caagaggtaaataatgcatcgcctcagaagtcaatagatagtcataatattccgaattgt
agtaatgcaaaaaggaaaacgcctaattttcttagcattacaagaaaatcaccaacacct
acacgaacgaatatattacgtatgtttaatcgatcacattcaacgggtcattcgttgatt
caaccgggtcaaaattgcgaaaggtttacgctaaagttaccggaggatgcacgtaaaaga
ttgatggagttaagctcgagtagagcttataataatggtgaagttttatctctagagagg
agtacttcatctaaggggtaccggttcgaaccgggaaatgggcggttcaagtttttatcg
actccgaatttgttatcaaataaacccggttcgccaaaggaagagagaagtgaaaaagaa
ccgaagaatttgttgaggtccgttaagtcgccgttaagtttgttatgtgtgacggaaaaa
gaggaggaaatgggagaaagatcttttacttatttaagatctaatccttcaagttag
DBGET
integrated database retrieval system
