Solanum stenotomum: 125862831
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Entry
125862831 CDS
T08385
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125862831
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125862831
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125862831
NCBI-ProteinID:
XP_049398902
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Position
4:complement(56328522..56331864)
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AA seq
395 aa
AA seq
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MSNFKAMTCTIVSLLFLFCLNITIPCCLAYNVVSFGARADGRTDSTSAFLRAWSAACHST
SQPNVHIPRGTFLVRTLNLNGPCKRRIEFRIDGTLVAPVNYNAIGHSEFWIMFYKVSGLN
VYGGTINARGHGYWSCRNGGKSCPQGARSIQFMWCNNVLLKGLTSLDSQRVHVGIGYSSN
VRVENVKITAPSGSPNTDGIHVQNSRGITIKGSIIKTGDDCISIGPGSMNMWIEQIGCGP
GHGISVGSLGSSNNEEGVTNITVTNSVFTKTQNGVRVKSWARPSGGYARNLMFSNLIMRN
VGYPILIDQNYCPDNNCPRQNSGVKVSQVTYKNVKGTSSTQQAIKFDCSKSNPCTGIQLL
DIKLTHNDRLRRSAVSYCRNARGRRGGTVIPRSCF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatttcaaagccatgacatgtactattgtttctttgttgttcttgttttgttta
aatataacaataccttgttgcttagcttacaatgtggttagttttggggcaagggcagat
ggtaggacggattcaacgtcagcttttctccgcgcttggtctgctgcctgccattctact
agccagcccaacgtgcatattccacgaggaacgtttttggtgaggacgttgaacttaaat
ggtccttgtaagagacgaattgagttccgaattgatggtactctcgttgctccggtgaat
tataatgcaattggacattctgagttttggattatgttttataaggtaagtggtcttaat
gtgtatggtggaactatcaatgcaaggggacatggttattggtcttgtcgaaatggtgga
aagtcttgtccacaaggagctaggtcgatacaatttatgtggtgtaacaatgtactgcta
aaaggtttgacatcactagacagtcaaagagtacacgtaggaattggttacagcagcaat
gtgagagttgaaaatgttaagataacagctccaagtggaagtccaaacactgatggcatt
catgtccagaactcaagggggattaccattaaaggcagtattatcaagaccggagatgac
tgtatttctattggccctggctccatgaatatgtggattgaacaaattggatgtggacca
ggacacggcatcagtgtagggagtttgggaagcagtaataatgaagaaggagttacaaat
ataacagtaacaaattctgttttcacaaagacacaaaatggtgttagagtaaagtcatgg
gcaagaccaagtggtggctatgctagaaatctcatgttctcaaatcttattatgagaaat
gttgggtaccctatactcattgaccaaaattattgtcctgataataattgccctcgtcag
aattcaggagtaaaagtgagtcaagtaacatacaagaatgtgaaagggacgtcatcgaca
caacaagctataaaattcgattgtagtaagtcaaatccatgtaccggaatccaattgcta
gacataaagcttactcacaacgatcgtttaagacgatcagccgtatcgtactgtagaaat
gcaaggggaagacgtggtggcacagttattccaaggagttgtttctaa
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