Solanum stenotomum: 125863019
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Entry
125863019 CDS
T08385
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125863019
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125863019
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GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Chromo_2
Motif
Other DBs
NCBI-GeneID:
125863019
NCBI-ProteinID:
XP_049399117
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Position
1:16434763..16440702
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AA seq
603 aa
AA seq
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MGVGGNFWDLLKPYARAEGFDFLRNKRVAVDLSYWIVQQETALKGQIRNPHIRLIFFRTV
NLFSKFGAYAVFVTDGTASPLKSQARIARFFRASGIDLSSLPVAEEAISIERNKAFQKCE
KECVELLELLGVPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGANCVIKNMQPNS
NEPFECYHMSDIESGLGLRRNQLIAISLLVGNDHNLTGVPGIGIETAVRFVKSFSDDEIL
YRLREIGGGDLQDFQHDVNLDSSLIPSSDESPRKTKVPHCSICGHPGSKKAHLKFSCQYC
SATANEGCIKKPLGFKCNCSPCDLDNKEKEQKRNENWKLKVCRRIASEQNFRNNEITEMY
LNKQQQYNGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIFLRDVASNSKD
QLLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNVICIPSEDSDTEQELGIADQSTD
LLDEPDSPQIHVNEGCSFLSTEEDMVLVQNAFPEKVSQFLRDKELKESRSRRKRPMKSEN
SESPRGVQLSISNFYRSSKVPCHEKPEESETGCPKISADASRERDKEPIRNYSKSVRRKL
LFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggcggaaatttctgggatttgctgaaaccctacgctcgagcagaaggattt
gatttcttgagaaacaaacgcgtagctgtggacttgtcatattggatcgttcagcaagaa
actgcactcaaaggccaaattcgaaatcctcatatcagactcatttttttccgtaccgtc
aacctcttctctaagtttggggcatatgctgtgtttgtcacggatggtactgcatcacca
ctaaagtctcaggcaaggattgcacgattttttcgggcatcaggaattgatttatcaagt
ttgccagtggctgaggaagccatttcaattgaaaggaacaaggcatttcagaaatgcgaa
aaagaatgtgttgagttgcttgaactccttggagtgccagtcctaaaagcaaaaggagaa
gcggaagcactctgtgcacagttgaatagagaaggactagttgatgcttgtattacttct
gacagtgatgcatttctctttggagccaattgtgttatcaaaaatatgcaacccaactcc
aatgaaccatttgagtgctatcacatgtcggatattgagtctggtctagggctgaggagg
aatcagttgatagcaatttcgcttttggtgggaaatgaccacaacttgactggtgtacca
gggatcgggattgaaacagcagttcggtttgtcaaatcttttagtgatgatgagatcttg
tataggttgcgggaaataggtggaggggatctacaggattttcagcacgacgtcaactta
gacagtagtttaatacccagttcagatgagagccctcggaaaaccaaagtgccacattgt
tcaatctgtggacatcccggaagcaagaaagctcaccttaagttctcttgtcagtactgc
agtgccaccgccaatgagggttgcattaagaagccattgggcttcaagtgtaattgctcc
ccatgtgatttggataataaggaaaaagaacagaaaagaaacgagaattggaagcttaaa
gtttgcagaaggatagcctcggagcagaatttccgaaacaatgagatcacagaaatgtac
ttgaacaaacaacagcaatataatggagattatcatttatcatgggaaaatccaaagatt
gatatgatagttgattatctggcttattatcagcactgggagccatcttatacacgtcaa
agaatgtttcctatgttatccaccatatttctgagagacgtggcctcaaattccaaagat
caattgttaggcggacaatatgaatttgactccattcagcgggtgaagacaagatttgga
catcaactttacgtaatcaattggaagaaaccaacacgtgaaatgagcaatgtaatctgc
ataccttctgaagactctgatacggagcaggagctggggatagctgatcagtccacagat
ttacttgatgaacctgattctccgcagattcatgtcaacgagggatgcagctttttgtca
actgaagaagatatggtgcttgtacagaatgcttttccagaaaaggtgtcccagttcttg
agagacaaggaactaaaagaatcaagatcacgtagaaaaagaccaatgaaatctgagaat
tcagaatcaccgagaggtgttcaactcagcatcagcaacttctatcgatcatccaaagtc
ccttgtcatgagaagccagaggagagtgaaactggatgtccaaagattagtgcggatgct
tctagagaaagagataaagaacccatccgaaactactccaagtcagttagacgcaagctt
ttgttcgattag
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