Solanum stenotomum: 125863086
Help
Entry
125863086 CDS
T08385
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125863086
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
125863086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
AAA_18
NACHT
NPHP3_N
AAA_14
nSTAND3
Viral_helicase1
ATPase_2
AAA_28
Cytidylate_kin
AAA_30
AAA_2
TsaE
TIP49
RNA_helicase
AAA_5
AAA_11
RuvB_N
DUF815
ABC_tran
ResIII
bpMoxR
AAA_33
AAA_24
IstB_IS21
AAA_17
KAP_NTPase
AAA_7
Rad17
PduV-EutP
SLFN-g3_helicase
NB-ARC
nSTAND1
AAA_19
AAA_3
Mg_chelatase
nSTAND6
CPT
SRPRB
NTPase_1
Motif
Other DBs
NCBI-GeneID:
125863086
NCBI-ProteinID:
XP_049399194
LinkDB
All DBs
Position
4:complement(42214424..42251809)
Genome browser
AA seq
454 aa
AA seq
DB search
MSAPMEISMVNAAEVNTSEQNGDPAPSPPPTLPEEKVLVSVEVCLKPSSTARIDDVRLSV
ERMLEKRSMSYVDGPIPVPIDDLFLAENVQHICVCDTDVWLENRDILLFWQVKPVVHVFQ
LSEEGPCEELSGDGQLSTFNEWILPAKEFNGMWESLIYESGLKQRLLRYAASALLFTEKR
VNSFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSFRYPRSQLVEVNAHSLFSKWFS
ESGKLVAKLFSKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ
LDKLKSAPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQACYEILRSCLQELLRTGI
LSNSQDRGCLVLPNYASLKDKMSEVVSTESQMFPHLGKQLLEAAEACEGMSGRSLRKLPF
LAHAALANPYSCEPGKFLHVMMQTAKREHPELSE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctccaatggaaatctccatggtcaacgctgctgaagtcaacaccagcgagcaa
aacggtgaccctgctccatccccaccacccacattacctgaagaaaaagtgctcgtttca
gttgaagtttgcttgaagccttcaagtacagctcgtattgacgatgttaggttatccgtt
gagagaatgctggaaaaaaggagtatgagctatgtggatggtccaattccagttccaatt
gatgatctctttcttgctgaaaatgtgcagcacatatgtgtgtgtgacacagatgtctgg
ctggagaaccgagatatccttctattctggcaagtaaaaccagttgttcatgtatttcag
cttagcgaggaaggaccatgtgaagaattaagtggggatggacagctttctacatttaat
gaatggattcttcctgcaaaagaatttaatggaatgtgggaaagcttaatatacgaatct
ggtctcaagcagagattgttgcgatatgctgcaagtgctttgcttttcactgaaaagaga
gtaaattccttccttgtatcctggaatcgcattattcttctgcatggacctccaggaaca
ggaaagacatctttatgcaaagcattagcacaaaaactttccatacgttttagctttaga
tacccacggagccaattggttgaagtcaatgcacattcattgttcagtaaatggttttct
gaaagtggcaagctggttgcgaagctgttctcgaagattcaagaaatggtagaggaagaa
aacaatctggtatttgttttgattgatgaagttgaaagcctcgctgctgctagaaaagct
gctttgtctggctctgaaccttcagattctatcagggtagtgaacgctctgttgacccag
ctggacaagttgaagtccgcgccaaatgtcataattctgactacgtctaatatcactgct
gccattgatatagcttttgtggatcgtgctgacattaaggcttatgttggaccacctact
cttcaagcatgttatgagatactccgatcatgcttgcaagagctattgcgtactggaatt
ttgtcaaattcgcaggatagaggttgccttgttcttccaaattatgctagtttgaaggat
aaaatgagcgaagtagtttcaactgagtctcaaatgtttccacatcttggtaaacaattg
cttgaagctgcagaggcctgtgagggtatgagtggtagatcacttagaaagctaccattc
ttggcacatgctgcacttgctaatccttacagttgtgaacctggcaaatttttgcatgta
atgatgcaaacagctaaaagagagcatccagagctgtccgagtga
DBGET
integrated database retrieval system
