Solanum stenotomum: 125863151
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Entry
125863151 CDS
T08385
Name
(RefSeq) eukaryotic initiation factor 4A-2 isoform X1
KO
K03257
translation initiation factor 4A
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125863151
03012 Translation factors [BR:
sstn03012
]
125863151
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125863151
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125863151
mRNA cycle factors
Stress granule specific factors
125863151
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-4
125863151
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125863151
Exosomal proteins of bladder cancer cells
125863151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Motif
Other DBs
NCBI-GeneID:
125863151
NCBI-ProteinID:
XP_049399259
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All DBs
Position
4:2297201..2309838
Genome browser
AA seq
413 aa
AA seq
DB search
MAGSAPEGSQFDARQFDAKMTELLGTEQQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP
DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcggcaccagaaggttctcagtttgatgctcgtcaattcgatgcgaaaatg
acggagctacttggtactgaacaacaagaatttttcacatcatatgatgaggtttatgac
agttttgatgccatgggtttgcaagaaaaccttctgagaggcatctatgcctatggtttt
gagaagccatcagctattcagcaaaggggcatcgttcccttttgcaagggccttgatgtt
atccagcaggcacaatctggaactggaaagacagcaactttctgctctggagttctccag
caacttgattacagtttagttgaatgtcaggctcttgttcttgcaccaacccgtgagctg
gcacaacagattgagaaggttatgcgtgcactcggtgactatctgggcgtgaaggttcat
gcttgtgttgggggtaccagtgtccgtgaagatcagcgtatccttcagagtggtgttcat
gtagtggttggtactccaggccgtgtctttgacatgttgcgcagacagtctcttcgcccc
gaccacatcaagatgtttgttttggatgaagctgatgaaatgctctccagaggtttcaag
gatcagatttatgatatattccagcttttgccaccaaaaatccaagtgggtgttttctct
gccactatgccaccagaggctcttgagattactagaaagttcatgaacaagcctgtgaga
attcttgtgaagcgtgatgagctcactcttgaaggtattaagcaattctatgtcaacgtc
gacaaggaagagtggaagctcgaaacactctgtgatctttacgagaccttggccatcacc
cagagtgtcatctttgttaacaccaggcgaaaggttgattggctcactgataaaatgcgt
ggccgtgatcacacagtatctgcaactcacggagacatggatcagaacactagagatatc
attatgagggagttccgatctggctcatctcgtgtgcttatcacaaccgatctccttgct
cgtggtattgatgtccaacaagtctcccttgttattaactacgatctgcctactcaacca
gaaaactatctgcatcgtattggtcgtagtggacgatttggaaggaagggtgttgcaatc
aactttgttaccaaggatgacgaaaggatgctttttgacattcaaaagttttacaacgtc
gtaattgaggagctcccagccaatgttgctgatcttctttga
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