Solanum stenotomum: 125863157
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Entry
125863157 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125863157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125863157
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125863157
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_occluded
DUF2129
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125863157
NCBI-ProteinID:
XP_049399277
LinkDB
All DBs
Position
1:16472409..16477068
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AA seq
251 aa
AA seq
DB search
MRAIFCGNLEFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDADDAIRRLDRIEF
GKKGRRLRVEWTKQDRGSRRPEISRKPAANTRPSKTLFVINFDPVHTQTRDIEKYFEPYG
RISNVRIRKNFAFVQYESVDDASRALEATNMSKFMDRVISVEFAIRDDDDRRNDRSPDRR
GRDMSPDRRGYDRRRSPSPYRRDRGSPDYGRGAPLNSRPQTRRSPEYGRAESPVNERYHS
RSPPPRERSRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatattttgtggcaatctggaatttgacgctcgccagtcagatgttgagcgg
cttttcagaagatatgggaaggttgatagggtggatatgaaatctggatttgctttcgtt
tatatggaggacgagcgagatgctgatgatgcaattagaagacttgacaggatagagttt
ggtaaaaagggacgcaggcttcgtgtagaatggactaagcaggatcgtggtagtaggagg
cctgaaatttccagaaaacctgctgcgaatactagaccttcaaagactttatttgtcatc
aactttgatccagttcatactcagacaagggacatagagaagtattttgaaccatatggt
agaatatcaaatgttcgaattagaaagaatttcgcgtttgttcagtatgagtcagtggac
gatgctagcagagcattagaagcaacaaacatgagcaagttcatggatcgagttatttct
gtggaattcgcaattcgagatgatgatgacaggagaaatgatcgcagtcctgacagaaga
ggtcgtgacatgtcgcctgacagaagaggttatgaccgtcggcgttcgcctagcccatat
agaagggataggggtagtcctgactatgggcgtggagcacctctaaactcgaggcctcag
accaggagaagtcctgagtatggtcgagccgaaagtcctgtcaatgagagatatcacagt
cgttcaccaccgccacgtgagaggtctcgatcttga
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