Solanum stenotomum: 125863244
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Entry
125863244 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 8-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125863244
00071 Fatty acid degradation
125863244
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125863244
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125863244
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125863244
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125863244
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125863244
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125863244
Exosomal proteins of breast cancer cells
125863244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125863244
NCBI-ProteinID:
XP_049399380
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All DBs
Position
4:65421248..65429542
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AA seq
731 aa
AA seq
DB search
MEGSDGSNPNTNVVERMTSSSYVSLFNDQGSFGVVAVVVIAMIVPLFLSVVLMGKKKVKQ
RGVPVKVGGEAGLAMRNARSAKLIEVPWEGATTMTALFEKSCRKHSSKRCLGTRKLVSRD
FVTAKDGRKFEKLYLGEYHWESYGKTFDRACNFASGLVNLGHDVETRAAIVSETRAEWII
AFQGCFRQNITVVTIYASLGDDALIHSLNETQASTLICDAKQLKKLAAIGSNLKTISNVI
YFEDDETAIDSSTCTNIDSWRVTSFSEVENLGKSNPIQPILPIKKDIAVIMYTSGSTGMP
KGVMITHGNIVATAAAVMTVIPKLGSNDVYLGYLPLAHVFELAAEIVMLTAGASIGYGSA
LTLTDTSNKIMKGTKGDASALKPTLMAAVPAILDRVKDGVIKKVEEKGGSAKKLFDIAFK
RRLTAIEGSWFGAWGLEKKLWEVMIFKKIRSVLGGDILFMLCGGAPLSGDTQRFINICMG
APIGQGYGLTETFAGAAFSESDDPSVGRVGPPLPCCYIKLISWEEGGYTIADKPMPRGEV
IVGGNSVTAGYFNNIDKTNEVYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQH
GEYISLGKVEAALSSSNYVDNIMAYADPFHNYCVALVVPSQKVLEKWAQENGIEHRAFSD
LCNKVEAVNEVQQSLSKVGKAARLDKFEIPAKIKLIPEPWTPESGLVTAALKLKREPLKA
KFKDELLKLYQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttctgacggaagtaatccaaatacgaatgtagtggagagaatgaccagcagt
agttacgtttccttgttcaatgaccaggggtcatttggggttgttgctgtggttgtaatt
gcgatgatagtacctttattcctctccgttgtgcttatggggaagaaaaaggtaaaacag
agaggagttccggttaaagttggtggtgaggcaggtcttgcaatgcgcaatgctaggtca
gccaaattaattgaagttccgtgggaaggggctacaactatgacagctttatttgaaaag
tcttgtaggaaacattcgagtaagcgttgtcttggaacaagaaaactagttagtagggac
tttgtaacagcaaaggatggaaggaagtttgagaaactttacttgggcgagtatcactgg
gagagttatgggaaaacgtttgatcgggcttgcaattttgcctctggacttgttaattta
ggtcacgatgtggagactcgtgctgctatagtctctgaaactcgggcagagtggatcatt
gcctttcagggatgcttccgccagaatataactgtcgttactatttatgcttctttggga
gatgatgcccttatacactcgttaaatgagactcaagcatccacattgatttgtgacgcc
aagcaacttaaaaaattggctgcaatcggttctaacctgaaaaccatctcgaatgtcata
tattttgaagatgatgagactgcaatagattcaagcacttgtacaaatattgacagctgg
agggtgacatctttctcggaagttgaaaaccttggtaaaagtaatcctattcaaccaata
ctgcctataaagaaagatatcgcggtgatcatgtatacaagtggaagcacgggcatgcct
aagggtgtcatgataactcatggcaacattgttgccacggcagctgcagttatgactgtc
attccaaaacttggcagcaatgatgtctatttggggtacctacctttagctcatgttttt
gagttagcggctgagattgttatgttgactgctggtgcttcaattggttatggctcggct
ctgactttgacagatacatctaataaaataatgaaagggaccaaaggagatgcctcagct
ttaaagcctactttaatggcagcagttccagccattctggatcgtgttaaggatggtgtt
ataaagaaggtggaggaaaagggaggatctgccaagaaacttttcgatattgcctttaaa
cgccgattgactgctatagaaggtagctggtttggagcatgggggctagagaaaaaatta
tgggaggtgatgatttttaaaaagatacgctcagtactcggaggagatatccttttcatg
ctttgcggtggtgcacctctgtcaggagatacacaaagatttatcaacatttgtatggga
gcgcctattggtcagggatatggcttgacagagacatttgcaggagcagccttttccgag
tcggatgatccttctgttggtcgtgttggtccacctcttccttgttgctatataaagctt
atttcttgggaagaaggaggttacacaattgctgataagccgatgcctcggggtgaagta
attgttggtgggaacagtgtgactgctggttacttcaacaatatcgataaaactaatgag
gtgtacaaggttgacgagagagggatgcgctggttctacactggtgatattggaaggttt
catcctgatggatgcctcgaaatcattgatagaaagaaagatattgttaaacttcagcac
ggggagtatatctcacttggaaaggttgaggctgcactttcctcaagcaattatgtggat
aacatcatggcctatgcagacccctttcacaattactgcgtagcactagttgttccttca
caaaaggtgcttgagaaatgggcgcaagaaaatggcatcgagcatagagctttttccgat
ctgtgcaacaaagttgaagcagtcaatgaggtccagcaatcactttcaaaggtaggcaaa
gctgcaagattggacaagtttgagattcctgcaaagatcaagttgatacccgagccatgg
acgcctgagtctggattagtcactgcagctctcaaactgaagcgcgaacccctaaaggcg
aaatttaaggatgaacttctgaagttgtatcaataa
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