Solanum stenotomum: 125863280
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Entry
125863280 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125863280
KO
K13210
far upstream element-binding protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125863280
03041 Spliceosome [BR:
sstn03041
]
125863280
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125863280
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125863280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
125863280
NCBI-ProteinID:
XP_049399420
LinkDB
All DBs
Position
4:2321872..2327773
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AA seq
654 aa
AA seq
DB search
MAEEAQYGTPEAGNNKRKYDDQTTPSPGPRRPTGFSAPIASLSPSDGAAPPSSYNNVPPP
MDDFQLAKQKAQEIAARLLNSAEAKKPRVDNNGGGAGAGGYDSYEHKPIVTPSVTSSYGY
PGQSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTNRAVELMGTPD
QIAKAEQLITEVLSEADSGGSGLVSRRLPGQQSGGEQFSLKVPNNKVGLVIGKGGETIKS
MQARTGARIQVIPLHLPPGDTSQERTVQIDGSSEQIEAAKQLVYEVISENRARNQGMSGG
YQQQGYQARPPTSWAPPGAPMQQSGYGYGQPGAYPSQPSYPGYPPQPASAGYASGWDQSA
AQNQQSQAGGYDYYNQQAPQQQQQTAGGSAASTDSSAYGYNQQSASGYSQGQAYAQDGYG
GYHAPAPQSGGYQGSGYEQQQGYSSTAGYGNASNPTSDGQNSSYGTQSDGSQAPPPASAT
GQQGYHSGQQPSPNPSYPSQGSAQAGYGVPPTSQGGYGTQPAGGYAASYGAPQAQKPPSQ
ASYGQPQQSPSAQAGYAQPPTAQPGYPQPAAQSGYTQADPNAQRPPSSAYGAPPAQPGYG
AQSYGAPPSYGQQPPPYNSAYGGYSQPPAYASEAAPTSQSVPPSGGVAKASPQS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagcacagtacggaacaccagaagccggtaacaacaagaggaagtacgat
gatcaaacgacaccgtctcctggtccacgtagacctactggattttctgctccgatcgct
tccttatctccttctgatggtgctgctcctccttcttcttacaacaatgttccgccgcct
atggatgatttccaattggctaagcagaaggctcaggagatcgctgctaggttgttgaat
agtgctgaagctaagaaacctagagttgataataacggcggtggtgctggtgctggtgga
tatgattcctatgaacacaagcccattgttactccttcagttacaagttcatatggttat
ccggggcaaagcaagaagattgaaataccaaatggcagagttggtgtgattataggaaaa
ggtggggagaccatcaagtatcttcaactccagtctggagccaaaattcaggttactaga
gacatggatgctgatcctaattctacaaatagagcagttgaactcatgggtactccagac
caaatagccaaggctgaacagttgattactgaggttctttctgaggctgattcaggtggt
tctggtctagtttcccgaagattacctggacagcaatctggaggagaacagttttccttg
aaagtccccaacaacaaggttggtcttgttattggaaaaggaggtgaaactataaaaagt
atgcaggcaagaactggagcacgtattcaggtgatccctttgcacttgcctccaggtgat
acatcacaggaaagaacagttcaaattgatgggtcaagtgaacagattgaggctgctaag
cagctggtgtatgaagtaattagcgagaatcgtgctaggaatcaagggatgtctggagga
tatcaacaacaaggttatcaggcccggcctcctacaagctgggcccctcctggtgcacct
atgcaacaatctggttatggctatggtcagcctggtgcatacccatctcaaccatcttat
cctggctaccctcctcaacctgcctctgctggatatgcctctggctgggatcagagtgct
gctcaaaatcaacaatctcaggcaggtgggtatgattactacaaccaacaggctccacaa
caacagcagcaaactgctggaggttcagctgcttcaactgattctagtgcctatggttac
aaccagcaatctgcctctggttacagccaaggacaagcttatgcccaggatggctatggt
ggatatcacgcacctgctcctcaatctggtggttatcagggttctggttatgagcagcaa
caaggttatagctctactgctggctatgggaatgcctcaaacccaacatcagatggccag
aactcgtcatatggtacccaaagtgatggcagtcaagcacctccaccagcatcagccacg
ggtcaacaaggatatcattctggccagcagcccagccctaatcctagttacccatctcaa
ggctctgctcaggctggatatggggtgcccccaacttctcaaggtgggtatggtacacag
ccagctggaggctatgctgctagttatggggcccctcaggctcaaaagcctcctagtcag
gcaagttatggtcaaccacagcagtctcctagtgcacaagctggttatgctcagcctccc
actgcgcaacccgggtatcctcaaccagctgctcaatcaggttatacccaggctgatccc
aacgctcagcgacctccctcttctgcctatggtgctccaccagctcagccaggttatggt
gcccagtcttatggcgctccgccaagttatggccagcagccaccaccttacaacagtgcc
tatggtggttactcccagcctccagcatatgcttctgaagcagctccaacctcgcagtct
gttccacctagtggtggggttgcaaaagcttcacctcagagttaa
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