Solanum stenotomum: 125863304
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Entry
125863304 CDS
T08385
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125863304
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125863304
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125863304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
PHD_NSD
DUF2921
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
zf-P11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125863304
NCBI-ProteinID:
XP_049399445
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All DBs
Position
4:61800494..61810651
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AA seq
569 aa
AA seq
DB search
MGMAKRLYFLRLKRRNYGVLFRVLFSLWFILGGICPVMGVRPLRERYRSWGDEWLLVRKD
ENELGPFSAWNITGTYRGSWRFLDSTNSSSRFPDFRKFNGNSVLELISNPTKITGVHYVQ
GAIIFHDVFDNEHGVGGAQIRVEGVYIWPFRQLRMVAYSGKDGEFAQEDDYLLSNPYHLL
GVFSSQIFQESSRDKIWKKKHSPFYEMEKNCNIEIAAQIARVSSSSNDGARDHYQLEGLI
ESPSVDADGDCFSPMLLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQS
GAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAI
WKANRPMNSGEGWEAMRRELSVLYSRFYGILLGGLLFMYEFHKFLRPILLLLYSFWIPQI
VTNVIRDSRKPLHPHYILGMTLTRLAIPLYVFGCPHNFMRIEPDKNWCICLGVFIALQAS
ILLLQHYLGSRWFIPRQILPEKYNYYRRFDQGANHATDCVICMTTIDHTQRSNNCMVTPC
DHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggcaaaaagattgtattttttgaggttgaagaggagaaattatggagttttg
tttagagttctttttagtttatggttcatccttggagggatttgcccagtaatgggtgtc
aggcctctcagagaaagatatcgttcgtggggagatgagtggcttcttgtaagaaaggat
gagaatgaattggggcctttttctgcttggaatataactggaacttacagagggtcttgg
aggttcctagattcaacaaatagctcttccaggtttcctgattttaggaagttcaatggc
aactcggtccttgaattgataagtaatccaacaaaaataactggtgtacattatgttcag
ggtgcaataattttccatgatgtttttgacaatgaacatggagttggtggtgcacaaata
agggtagaaggtgtatatatatggccatttagacaacttcgaatggtagcttacagtggc
aaagatggtgagtttgcacaggaagacgattatctattatcaaatccatatcacttgctt
ggtgttttctcgtcccagatattccaggagtcttctcgagataagatttggaaaaagaaa
cactcaccgttttacgagatggagaaaaattgtaatattgaaattgctgcacaaattgct
cgtgtctcatcatcctcaaatgatggagctcgtgatcattatcaactagaaggattgata
gagagcccttcagtggatgctgacggagactgtttctcaccgatgcttttgaatgctact
tctgtcaatatagaggtttactacaacaaagcggtgaactacacattgatggtcacattt
atatcttttctgcaagtgctccttctgattcgacaaatggaacatagcaacacccaatca
ggagctgccaaagtttcaattctgatgattggacaacaggctatcatggatgcttatctt
tgtcttttgcatctgaccgcagggatacttgttgaatcccttttcaatgcttttgcaact
gctgccttcttcaagtttgttgtcttctcgatatttgagatgagatatctacttgctata
tggaaggcaaataggcccatgaatagcggagagggttgggaagcaatgaggcgcgaatta
tcagtactttacagccgtttctatgggatccttttaggcggcctattgttcatgtatgag
tttcacaagtttctgcgccctattcttctacttttatactcattctggatacctcaaatt
gtaactaatgtcattcgcgactcaagaaaaccgttgcaccctcattacatcttgggaatg
actctaactcgtttggcaattccattatatgtatttggctgccctcacaatttcatgcgt
atagagcctgataagaattggtgcatctgcttgggagtttttattgcgctgcaggcatca
attcttctgttgcagcattaccttggatctcggtggttcattccacgtcagattttaccc
gagaagtataactattatagaaggtttgatcagggtgcaaatcacgccactgactgtgtt
atttgcatgactactattgatcatactcaacgctcaaataattgcatggtgacaccttgt
gatcatttctttcactccggttgtttgcaaagatggatggacataaagatggagtgtcca
acatgccgacgtcctcttccaccagcttga
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