Solanum stenotomum: 125863388
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Entry
125863388 CDS
T08385
Name
(RefSeq) protein GIGANTEA-like isoform X1
KO
K12124
GIGANTEA
Organism
sstn
Solanum stenotomum
Pathway
sstn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125863388
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NCBI-GeneID:
125863388
NCBI-ProteinID:
XP_049399529
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Position
4:5617784..5633662
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AA seq
1171 aa
AA seq
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MASSSERWIDSLHFSSLFWLPPQDAEQRKDQITAYVKYFGQFTSEQFPEDIAELIRNRYP
SKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFASFISLVCSRSEK
EYSEQWALACGEILRILTHYNRPIFKVDRQDKGTDRSTSGSHTSTSKSSCSEPGVPSIQH
ERKPIRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGDLKPPSSAASRGSGKHPQL
LPATPRWAVANGAGVILSVCDEEVSRYETATLTAAAVPALLLPPPTTPMDEHLVAGLPPL
EPYARLFHRYYAIASPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGLRL
PRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQIEEIEVQHEPLG
GDTSCNKKQREVTAAEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAVD
LPEIVVATPLQPPILSWNLYIPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPPDS
SREETRKTRYVFGSAFKNLAVAELRTMVHSLFLESCASVELASRLLFVILTVCVSHEAKP
NGNKRPKGEDSHPPSEIRVDTPATIGKQRPIGSKKVKKQGPVAAFDSYVLASVCGLSCEL
QLFSIISRGPNHPDPKIVMDEAKPANDSSIELRNGIHSAVSHTRRMLEILEALFSLKPSS
VGTSWSFSSNEIVAAAMVAAHISDLFKRSKACMHSLSILIRCKWDNEIHSRASSIYNLID
IHSKTVASIVNKAEPLEAYLIHAPVLKERPRCLNGKKHYKYTSRNCLTSEQPSGPLCKDS
YDCKSSLVCEKASDSSSHSSEIAGCTISKVFANFSLDATDLANFLTKDRHFGFNCNAQDL
LKSVLAEKQELCFSVVSLLWHKLIASPETQPIAESTSAQQGWRQVVDALCNVVSAAPGKA
ATAIVLQAERELQPWIAKDDDLGQQMWRINQRIVKLIAELIRNHDIAESLVILASNPDLL
LRATDGMLVDGETCTLPQLELLEVTARAIQPVLDWGESGQSVADGLTNLLKCRLPATVRC
VSHPSAHVRALSTSVLRDIMYAGSVKPSAKQAADVNGIHNPAYQYLGISISDWKADIEKC
LMWEANSRLENGMSAQFLDTAARELGCTISV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtcaagcgaaaggtggattgatagtcttcatttctcttcattattttggctt
cctccacaagatgcagagcagcggaaggatcaaattaccgcgtatgttaagtactttggt
cagttcacatcagaacaatttcctgaagatatagctgagctcatacggaaccggtatcca
tcaaaggagaaccgactttttgatgatgttttagcaacttttgttcttcatcacccggag
catgggcatgctgtagttcatccaattatttcatgcatcattgatggtacactggagtat
gataaaagtagtccaccttttgcttcttttatatcattggtttgctcaaggagtgagaag
gaatattctgaacaatgggcccttgcatgtggagagattttacgtatactaacacactac
aaccgcccaattttcaaagttgatcgtcaggacaaaggaacagatagaagcaccagtgga
agccacacttcaacaagtaaatcttcctgtagtgaacctggtgtgccttctatacaacat
gagagaaaacctataagaccattgtctccatggatcactgatatattgcttgctgcacca
ctagggattagaagtgattacttccgttggtgtggcggtgttatgggaaagtatgctgct
ggagatctcaagcccccatcaagtgctgcttctcgtgggtctgggaagcatccacaacta
ctgcctgcaactccaaggtgggctgttgctaatggtgctggcgttattttaagtgtttgt
gatgaggaagtttctcgctacgagactgctaccttgactgcagccgctgttcctgcactt
ctgcttccacctccaacaacgcctatggatgagcacctcgttgcaggactaccaccactt
gagccatatgcacgtttatttcatcgatattatgcaattgcaagtccaagtgccacacag
aggcttcttgttggacttttagaagctccaccatcttgggctccggatgcacttgatgct
gcggtacaactagtggaacttctgcgagcagctgaagattatgcatctggattgcgtctt
cctaggaattggatgcacttgcatttcttgcgtgcaattggaattgccatgtccatgaga
gcaggaattgctgcagattctgcagcagctttacttttccgagtactttctcaacctgct
ttgctattcccccccttgaggcaaattgaagaaattgaagttcaacatgaacctctgggt
ggcgacacttcatgtaataaaaagcagagagaagtgactgctgcagaagccacagtagaa
gccactgcccaagggattgcatcaatgctttgtgcacatggtccggaggttgaatggaga
atatgtaccatctgggaagctgcttatggattgattcctttaagttcatctgcagttgat
ctccctgagattgtagttgccacccctttacaaccacccattttgtcatggaacctgtat
ataccccttcttaaggttcttgagtatcttcctcgtgggagtccatctgaaacttgtctt
atgaaaatatttgttgcaaccgtcgaagcaattcttcagagaacgttcccgcctgattcc
tctagagaagaaaccagaaaaaccagatatgtttttggctctgcctttaaaaatcttgct
gtggcagaactgcgaaccatggttcattcattgttcttggagtcatgtgcttctgttgag
cttgcatctcgactactttttgttatcttaacagtatgtgtcagtcatgaagcaaaacca
aatgggaataaaaggcctaaaggtgaagattctcacccacctagtgaaatcagggtagac
actccggcaaccatcggaaaacaaagaccaataggaagtaagaaagtgaaaaaacaagga
cctgttgcagcatttgattcttatgtccttgcttctgtctgtggactttcttgcgaactt
cagctcttcagtataatttcaagagggcctaatcatccagatccaaaaatcgtcatggat
gaagccaagcctgcaaatgattcatctattgagctacgaaacgggattcattctgccgtc
tctcatactcgaaggatgttggaaattctagaggcacttttttctcttaaaccatcgtct
gttggaacctcatggagcttcagctcaaatgagatagttgctgcagctatggtagctgct
catatttctgatctgtttaaacgctccaaggcctgcatgcactctctttctattttgata
cggtgcaagtgggataatgaaattcattccagggcatcgtcaatttataacctaattgat
attcatagcaaaactgttgcatcaattgtcaacaaggctgaaccattggaagcttatcta
atacatgcaccagttctgaaggagcgacctagatgcttgaatgggaaaaaacattataaa
tacacaagtcgtaattgcttaacatcagaacagccatcagggcctctgtgtaaagactcc
tatgattgtaaaagttcacttgtgtgtgagaaagcttcagactcaagttcacactctagt
gagattgctgggtgcaccatcagcaaagtgtttgcaaatttctccttggatgctacagac
ttggccaattttcttacaaaggacaggcattttggatttaattgcaatgcacaagatctt
ttaaaatcagtacttgcggagaaacaagaattatgtttttctgttgtctcattgctctgg
cacaagttgattgcatcacctgaaacacaacccattgcagaaagcacttccgcccagcaa
ggatggagacaggtggttgatgcactatgcaatgttgtatcagcggcacctggaaaagct
gcaacagccattgttcttcaggctgagagggaattgcaaccatggattgctaaagatgat
gaccttggtcagcaaatgtggagaattaaccaacgtatagtaaaattgatcgcagaactg
ataaggaatcatgatatagcagaatctttggtaattctggctagtaacccagacctcctt
ttacgggccacagatgggatgcttgtcgatggagaaacatgcaccttaccacagctggag
cttttggaagtgacagctagagcaattcaaccagtgcttgactggggagaatctggacag
tcggttgctgatggcctcacaaacctattgaagtgtcgcttacctgccacagttcgctgt
gtttctcatccaagtgcacatgtccgtgctctcagtacatcagttcttcgtgacattatg
tatgctggttcagtaaaaccaagtgccaaacaagcagcagatgtaaatggcatccacaat
cctgcttatcagtaccttggcataagcatcagtgactggaaagcggatattgagaagtgt
ttgatgtgggaagctaatagccggcttgaaaatggaatgtctgctcaatttcttgatact
gctgctagggaattaggctgtactatatcagtctga
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