Solanum stenotomum: 125863903
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Entry
125863903 CDS
T08385
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125863903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125863903
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125863903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS
NANM
PAS_3
PAS_4
F-box-like
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
125863903
NCBI-ProteinID:
XP_049399836
LinkDB
All DBs
Position
1:complement(99515122..99519681)
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AA seq
637 aa
AA seq
DB search
MKKMEEEEENMRREKRLKCINMEEDEDEDEEEGEILDEDDDDDEDEEEIENIEVPSQPVG
FFYPLTTPSSIVVSDALDPDLPVIYVNSAFESSTGYRADEVLGRNCRFLQFRDPRAQRRH
PLVDPVVVSEIRRCLEEGVDFQGELLNFKKDGTPVVNRLRLAPIHSDDGTVTHIIGIQMF
SETKIDLNTVSYPVFKETCQPHCDESSEYSIKSGNLLHREMCGILQLSDEVLAHNILSRL
TPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGADVTGVLEHMTKKLAWGRLARELTTL
EAVCWKKLTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRR
VSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTPPL
PRSWHSSCTMEGSKLVVSGGCTDAGVLLSDTYLLDLTNDKPTWREIPTTWAPPSRLGHSL
SAYGKTKILMFGGLAKSGHLRLRSGESYTIDLEDERPQWRQLECGAFTGVGSQNAVVPPP
RLDHVAVTMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPLWRTLNVPGQPPKFAWGHST
CVVGGTRVLVLGGHTGEDWVLNELYELCLASKQDSDA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatggaagaagaagaagagaacatgagaagagaaaagagattgaaatgcata
aacatggaggaagatgaagatgaagatgaagaagaaggagaaattctcgatgaggacgat
gacgatgatgaagatgaagaagaaattgaaaatattgaagttccttcacaaccagttgga
tttttctatcctttaacgacgccgtcttcaatcgtcgtctccgatgcattagatcctgat
cttccggttatatatgtgaattctgcgtttgaaagctctactggttatcgcgctgacgaa
gtcctcggtcgtaactgtcggtttttgcaatttagagatccacgcgctcaaaggcggcat
cctttggtggatcctgttgttgtttctgagataagaagatgtcttgaagaaggtgttgat
ttccaaggggagcttctcaactttaaaaaagatggtacccctgtggtgaacaggctaagg
ctagcacccatacatagtgatgatggcacagtgacccatattatagggattcaaatgttt
tctgaaacaaaaattgacctgaatactgtgtcatatcccgttttcaaagaaacttgccag
cctcactgcgatgagtccagcgagtactccattaaaagtggtaatttattgcaccgtgaa
atgtgcggtattcttcagctctctgatgaagttctagctcacaacattttatctcgattg
actccaagggatgttgcatccattggttctgtttgtagaaggatacgccaattgacgaaa
aatgagcatgtgagaaaaatggtctgtcaaaatgcatggggagctgatgtcacaggtgtg
ctggaacacatgacaaagaagttagcttgggggcgtctggctagggagctaaccactctt
gaagcagtttgttggaagaaactgacagtaagaggtgctgtagagccttcacgttgcaac
ttcagtgcatgtgctgcagggaacaggctagtgttatttggaggggaaggtgttaatatg
cagccaatggatgacacatttgttctcaatcttgatgctgctaatccagaatggcgacga
gtgagtgtcaaatcatctccaccaggacgttggggccatactctctcatgtcttaatggt
tcctggttggtggtgtttggtggatgtgggaggcagggattgcttaatgacgtgtttgtt
cttgatttagatgctaaacagcctacatggaaagaagtatctggtggaactccccccctt
cctaggtcttggcacagctcttgcacaatggaaggctcaaagttagttgtttcaggtgga
tgcacagatgcaggtgtacttctcagtgacacatatttgttggatctcaccaatgacaaa
cctacctggagagaaattccaactacatgggctcctccgtctagattgggacactcactc
tcagcttatgggaagacaaaaattctaatgtttggtggccttgccaaaagcggtcacttg
cgtttaagatcaggtgaatcatacactattgatttggaggacgaaaggccacaatggagg
caacttgagtgtggtgcgttcacaggagtaggaagtcaaaatgctgtggttcctcctcct
agacttgatcacgttgctgtaaccatgccttgtggccgtatcatcattttcgggggttcg
attgccggactgcactctccttcacaactctttctactagatccttcagaggaaaaaccg
ttatggaggactctcaatgtacctgggcaacctccaaagtttgcttggggtcatagcaca
tgcgtggttggaggaacaagggtcttggtcctaggaggccataccggggaggactgggtt
ctgaacgaattgtatgaattgtgcttagcgagcaagcaagattctgatgcatga
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