Solanum stenotomum: 125863920
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Entry
125863920 CDS
T08385
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125863920
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125863920
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125863920
NCBI-ProteinID:
XP_049399848
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Position
5:38264859..38268587
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AA seq
393 aa
AA seq
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MTSNSCFKIGFILGLVFVYTNAQEKVFNVHSYGAKADGRTDDSKALLNGWRDACKWNGKA
TLLIPLGEYMVNGAIFKGPCNGSSMTFEMKGVIKAPTDPKIFCNEYWIRFQYMNGLKIKG
HGTFDGQGACAWGKHQCATPLPFTVGFYFINNLIVHDIHSNNSKGVHINVFNCTNGFFRH
VKITAPDDSPNTDGIRIGYSNNIHIVDSNIGTGDDCISMVAGSQSINISGVTCGPGHGIS
IGSLGKLSKNDVVKDIHTKNCTFINTQNGVRIKTWASSMTGMATNITFEDIIMIKASNPI
LIDQQYCPTGNCKKQGSSVQVKEVTYKNIRGSSSSKVAVIFDCSDSHPCNGIIVKDINLV
YNERDGPATSSACENAIGKATGIELPPSCLKKS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaactcttgtttcaaaataggctttatattaggccttgtttttgtatacact
aatgctcaagaaaaggtcttcaatgtccattcctatggtgctaaagcagatggaaggacg
gacgatagcaaggcacttttgaatggttggagggatgcatgcaagtggaatggaaaagcc
acattgttgatacctttgggggaatatatggtaaatggtgcaatctttaaaggaccatgc
aatggatcgtccatgaccttcgaaatgaaaggagttattaaagctccaacagatccaaag
atattctgcaatgagtattggattcgttttcagtatatgaatggcttaaagattaaagga
catggaacatttgatggacaaggggcttgtgcttggggaaagcatcaatgtgcaaccccc
cttccctttacagttggattctattttatcaataatttgattgtgcatgacatacattca
aacaatagcaagggtgtacacatcaacgtcttcaattgcacaaatgggttttttaggcat
gttaaaataacggcaccagatgacagccctaacactgatggtattcgtatagggtactca
aacaacatccatatcgtggattcgaacattggcaccggggatgattgtatatctatggtt
gcaggcagtcaaagcatcaacatttcaggagtcacttgtggccctggccatggaataagt
ataggtagcttaggaaaactatctaaaaatgatgttgtgaaggatatacacaccaaaaat
tgcactttcatcaatactcaaaatggtgtgagaattaagacttgggcatcatcaatgact
ggtatggctacaaatataacatttgaggatattatcatgataaaagcatcaaatcctata
ttaattgatcaacaatattgtccaacgggtaattgtaaaaaacagggaagctcagtgcaa
gtgaaggaggtgacatacaaaaacataaggggatcttcaagttcaaaagtagcagttata
tttgattgtagtgattcacatccttgtaatggaatcatagttaaagatatcaatttggta
tataatgagcgtgatggtcctgcaacgtcatcagcgtgtgaaaacgccataggaaaagct
acgggtatcgaattgcctccaagttgtttaaaaaagtcataa
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