Solanum stenotomum: 125864014
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Entry
125864014 CDS
T08385
Name
(RefSeq) two-component response regulator ARR12-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125864014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125864014
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125864014
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
KaiA_N
Motif
Other DBs
NCBI-GeneID:
125864014
NCBI-ProteinID:
XP_049399923
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All DBs
Position
5:complement(43238361..43243068)
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AA seq
559 aa
AA seq
DB search
MATGYYDIIDEVRVVLVDPETENVTEMVDLLKSYDYKVITVRTSSEAVEMLSKGEKKVDV
IIISVHSPNLDSFKLLAQAMTLNIISLFVCDAYNELLAKKALKEGACLFVQRPLNEEIIK
YLWQFVLRRKIEREKAKKGSEDGDKRIVKDVDTNNMDGDNEVLSKETNDVANTEEHRNNI
DEAEDNITLNGKYKRRRKNNRKDRKKDKVIKQKNCVKWNADLHAKFMESLEQLGEGRCYP
KDIVEVMDVSGLTRMQVASHLQKCRFNNWKSPEEHKSNRRLSGQESLSEFPQKNSNRKYG
TMPRLQNNIPNQIQRGPEFPFSTLNTSNIFARGVSSIQEKLYPPQFQVQPHYPNIDNSLN
NPFLSVQNNVGGVLQQHQHRPLLEMFGSLRLHDPIIGNITHRPGSAFNTWNRHTQSEYNL
DLNVAHKTTHSGSKIMHDIGVENTTINDYNLNVNAGNTNTDSGSTMMSDTDAENATSDEL
GTINANFQQHIAESNMSYPSNIATTYKSDIEGSDSNEKEDCDAYSNFNNMGYFFQNLGPP
GANLPNSYDSEFDQVYSDD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctactggttattatgatattatagatgaagttcgggtggtgctagttgatcccgaa
acagagaatgtcactgaaatggtggatttgctgaagtcttatgactacaaagttattacg
gttcgtacatcttcagaagcagtggaaatgctctccaaaggagagaaaaaagttgatgtt
attataatcagtgttcattcaccgaatttggattcttttaaacttttggctcaagctatg
accttgaatataatttcactatttgtatgtgatgcatacaatgaactcttggcaaaaaag
gctttgaaagaaggagcatgcctttttgtacaaaggccactaaatgaggaaattataaaa
tacttgtggcaatttgtattgaggagaaaaatagaaagagagaaagcgaaaaaaggatca
gaagatggagacaagaggattgttaaagatgttgatacaaataatatggatggagataat
gaagtattatctaaagaaacaaatgatgtggctaatactgaggaacatagaaataatatt
gatgaagctgaagacaatatcacattgaatggaaaatacaagaggaggaggaagaacaat
agaaaagatagaaaaaaggataaggttattaagcaaaagaactgtgtaaagtggaatgcg
gatcttcatgcgaaattcatggaaagtttggaacaattaggtgaaggaagatgttaccca
aaggatatagtggaggttatggatgtgtctggtcttacaaggatgcaggtagcgagtcat
ttacagaaatgtcgtttcaacaattggaaatctccagaagagcacaaaagtaatcgtcgt
ctatcaggccaagaatctttaagtgaatttccacaaaaaaatagcaatagaaaatatggg
acaatgccccgtcttcaaaataatattcctaatcagatccaaaggggaccagagtttcca
ttttcaactctcaataccagcaacatttttgccagaggggtgagttcaattcaagagaaa
ctctatcctccacaatttcaggttcaacctcactaccccaacattgacaattcattaaat
aatccatttttgtctgtgcaaaataatgttggcggtgtgcttcaacaacatcagcataga
ccattattggaaatgtttggttcactaaggctacatgacccaattataggaaacattact
cataggcctggctcggcatttaacacttggaatcgtcatactcaaagtgagtacaacttg
gacctcaatgtagctcataaaacaacacattcaggtagtaaaataatgcatgatataggt
gttgaaaatacgactattaatgactacaacttgaatgtgaatgcaggaaatacaaacaca
gattcaggtagcacaatgatgtctgatactgatgctgaaaatgcgactagtgacgaactt
ggaacaataaatgctaattttcagcaacatattgctgaatcaaatatgtcttatccgagt
aatatcgcgacaacatataagagtgatatagaaggaagtgattcaaatgagaaggaagat
tgtgatgcatattctaatttcaataatatgggttatttcttccaaaatcttggacctcca
ggtgctaacctacccaattcatatgacagtgagtttgatcaagtttattctgatgattag
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