Solanum stenotomum: 125864163
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Entry
125864163 CDS
T08385
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125864163
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125864163
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
A1_Propeptide
Motif
Other DBs
NCBI-GeneID:
125864163
NCBI-ProteinID:
XP_049400041
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Position
1:85734705..85737588
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AA seq
439 aa
AA seq
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MAFIRGNSILLILFIWLASLVPHLHARIAEFDAYLEKQALEALNSSLEAYTHNPEEVTNA
FNKEVGNALLKYKSLRRHLKEKNKCMATNPIDRCWRCDKNWAENRKDLEECARGFGHKTT
GGKNGKYYVVTDESDDNVQEPKPGTLRHAVIQEEPLWIIFEKSMVIKLQQELMITSDKTI
DGRGVAVHIANGAGLTIQFVHNVIIHNIRIQNIISTNGGMIRDSVNHIGLRTVSDGDGIS
IFGSNHIWIDHCTLSECTDGLVDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGEGLIQRMPRCRWGFFHVVNNDYTHWQMYAIGGSAHPTIISQGNRFKAADNP
NTKQVTKRDYAPESEWKKWQWVSEGDSFLNGAYFVESGPQDKKKTALTKNHKIKFKPGSH
AGRLTRFAGVLKCKPGIPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttattagagggaattcaattttgttaatattgttcatatggttagcttcatta
gtcccacatttacatgccagaattgctgaatttgatgcatatttggaaaaacaagctttg
gaagccctcaactcttcacttgaagcatatactcataatcccgaggaagtaactaatgca
ttcaacaaagaagttggaaatgcattgctgaagtataaaagcttaaggaggcatcttaaa
gaaaaaaataaatgcatggcaaccaatccaattgacagatgttggaggtgtgacaaaaat
tgggctgaaaacaggaaggatttggaagagtgtgctagaggatttggccacaaaacgacc
ggtggtaaaaatggcaagtactatgttgtcaccgatgagtcagatgacaacgtgcaggaa
ccaaaaccggggacccttcgtcatgctgtgattcaagaggagccattgtggatcatcttt
gagaaatcaatggtgatcaagttgcaacaagaacttatgatcacgagtgacaagacaatc
gatggcaggggagttgctgttcacatagccaatggtgctggattaacgatccaattcgtg
cataatgtcataatccacaacatcaggattcagaatatcatatctactaatggtggcatg
ataagagattctgttaaccatattggtctaaggacagtgagcgatggcgatggcatttcc
atttttggttccaaccatatctggattgatcattgcactttgtcagaatgtaccgatggc
cttgttgatgccatcatggcttccactgcaatcactatttctaattgcaaattcaaccat
cataacgacgtgatgcttttgggggcaactgatgcctttcctcaagattcaataatgcaa
gtcacagttgcattcaatcggttcggggagggattgattcagaggatgccaaggtgcaga
tggggattcttccatgttgtcaacaatgactacactcattggcaaatgtacgcgattggt
ggcagcgctcatccaaccattatcagtcagggtaatcgtttcaaggctgccgataatcct
aatactaagcaggtgactaagagggattacgcaccagaatccgagtggaagaagtggcaa
tgggtatcagagggcgattcgttcttaaatggagcttattttgtggagtcaggaccacaa
gacaagaaaaaaactgcattgacaaaaaatcataagatcaagttcaagcctggttcacat
gcaggacggctcactcgctttgctggcgtgctcaagtgcaaacctggcataccttgttag
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