Solanum stenotomum: 125864279
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Entry
125864279 CDS
T08385
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125864279
Spliceosome [BR:
sstn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125864279
Other components
Complex C specific factors
125864279
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
125864279
NCBI-ProteinID:
XP_049400148
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Position
5:complement(1934811..1938009)
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AA seq
866 aa
AA seq
DB search
MDDYQEMERFGMENDFEDGQWIGGEFYYRKRKEKKQVQTKDDTLYGVFASGDSDSDYEGS
SSKKRKKGFSSKPDLTKPVNFVSTGIVMPNKEIDQNSKEENEEQLMPEEENKGLGLGFGA
ASVGGLGFGTSSSSNNNNNADEVEADGGNFLPTAFGRKIKEGALRREKEREKEKSMLAKK
SSPSESGRREPGGDVGGFEKFTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNM
GMGFNDYKETSSAPALQESDGKQTVARPAILPVEGRSKEKLWSKQAKKVKKVYVTAEELL
AKKQEQGLETVQKVFDMRGPQVRVLTNLENLNAEEKAREKDVPMPELQHNIRLIVDLAEL
DIQKIDSDLRNEMETVVALQKEKEKLQAEAARQKRQFDNMEEIVGVLDRIGEESTSGTLT
LDSLAKAFADLQQQYVEEYTLCNLSSIACSYALPLFIRIFQGWDPLQTPTHGLEVVSLWK
DLLQGNDIFAISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLPSS
VLQSILENIILPKLSAAVNSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRSRLESVL
HAWHPSDMSAYYILSPWKTVFDAINWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFYWV
HTWATAIPIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQANEH
IRYRLNLALDMMNQAVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAVQAQSRPSVGSN
SGIQMDGAVDMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKVFA
QVEDRWSFVSLEQLLDLHNRSGSKRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttggtatggagaacgattttgaagatggacag
tggatcggtggtgaattctactatcggaaacgtaaagagaaaaagcaagttcaaaccaaa
gatgatacgctctatggtgtttttgcttctggcgatagtgattctgactacgaaggatca
tcctctaagaagcgaaaaaaaggtttttcatcgaaacctgacctaaccaaacctgttaat
tttgtatcaactggaattgttatgcctaacaaagaaattgatcagaattccaaagaggag
aatgaggagcagctaatgccagaagaagagaataaaggtttaggattgggatttggggca
gcatctgttggcggccttggatttggtactagtagtagttcgaataataataataatgct
gatgaggttgaagctgatgggggaaactttctgcccactgcttttggtaggaagatcaaa
gaaggtgcactaagacgtgagaaggaaagggaaaaggagaaatctatgttggcgaagaaa
tcttcgccgtctgaatcagggagaagggaacctggtggtgatgttggtggctttgagaag
tttaccaaagggatagggttgaagttgcttgagaagatgggttataagggaggtgggttg
ggtaaaaatgagcaaggaattgtggctccgattgaggcgaagctgaggcctaagaatatg
ggaatgggattcaatgactacaaggagactagtagtgcaccagctcttcaagaatcagat
ggaaagcagactgttgctcgtcctgcgatactacctgtggaaggtcgatcaaaagagaag
ctttggtcaaagcaagctaaaaaagtgaagaaggtttatgttacagctgaagagttgtta
gctaaaaagcaggagcagggcctggaaactgttcagaaggtgtttgatatgagaggtcca
caagttcgagtcttgacgaatctggagaacttgaacgccgaagaaaaagcaagggagaaa
gatgttccaatgcccgaacttcagcataatatcaggttgattgtggacttggcagaactt
gacatacaaaagattgatagtgatttgagaaatgagatggagacagttgttgctttgcaa
aaggagaaggagaagcttcaagctgaggcagctcgtcaaaaaaggcagtttgataatatg
gaagagattgtaggtgtattggaccggataggggaagagagcacatctggtaccctgacc
ctagactcccttgcaaaagcatttgcagacttacagcagcagtatgttgaggaatacaca
ctctgcaacttgtcaagcatagcgtgctcatacgctctgccattgttcattcgaattttt
cagggatgggatccacttcaaactccaacacatggattggaggtggtttcactgtggaag
gatcttttgcaaggtaatgacatttttgctatctctgatgctgcatctccttatactcaa
ctatttatggaagttgtgttccctgctgttagaatatctggcaccaatacttggcaggct
agggaccctgaaccaatgcttcgttttttggattcttgggagaagctattgccttcttca
gttcttcagtcaatactggaaaacattattttgcccaagttatcagctgctgtgaactcc
tgggatccacgtcgagaaacagttccaatacattcctgggttcatccatggttgccctta
ttgggtcaaagattggaaagttgctaccacactatacgtagcagattggaaagtgtactg
catgcttggcacccaagtgatatgtctgcatactacatactgtctccgtggaagactgtt
tttgatgcaattaactgggaaaaactaatggtccgatttattgttccaaagttgttagca
gtgatgcatgaattccaaataaatccagcaaatcagaaccttgatcagttctattgggtc
catacttgggctactgctattcccatccatcacatgcttccaatactggatatattcttc
aacaagtggcaagaagttttgtaccactggttatgctcaaacccgaactttgaagaagtc
acaaaatggtatttgggttggaaggaacttattccacctgaacttcaggcaaatgaacac
attcgctatcgtctaaatcttgctctagacatgatgaaccaggctgttgaaggcttggag
gtcgttcagcctggtttaagggagaacataagttatcttagggttcttgaacaaaggcaa
tttgagactcagaaaaaagcagcagtacaagctcaatcccgcccttctgtgggctcgaac
agtggtatccaaatggatggtgcggttgacatgagcatgaaagaagttattgaagttcat
gctcaagagaatggcttgctgttcaagcctaagcctggcaggatgcaagatggtcatcag
atatatggttttggtaacatcagtattattatagattctctcaatcagaaggtatttgcg
caagttgaggacaggtggtcttttgtgtcacttgagcagctgttggacctgcataatcga
tctgggtcaaagcgtcgatag
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