Solanum stenotomum: 125864383
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Entry
125864383 CDS
T08385
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
sstn
Solanum stenotomum
Pathway
sstn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125864383
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
125864383
NCBI-ProteinID:
XP_049400311
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All DBs
Position
5:complement(21363881..21369887)
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AA seq
1123 aa
AA seq
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MSSSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQR
PKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEH
PVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
GYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV
VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLC
DMLMRDAPVGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTD
STGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGE
KDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTISIH
TKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAI
GKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSRDSSPISLIVNACASKDV
RDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA
MTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGF
FARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLA
YIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYL
DLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLL
VSVNSTPSGGQLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASE
EGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcaagacctagccaatcttccaccacttcatcaagatcaaagcacagtgct
aggatcattgcacagacctctattgatgcaaagttgcatgcagactttgaggagtcaggt
gattcctttgactattcaagctcggtgagggttacaaatgtcgctgagggtgagcaaagg
ccgaagtcagacaaagttaccaccgcttaccttcatcagatccaaaagggcaagtttatc
cagccatttggttgtctgttagccctggatgagaaaacattaaaggtcatagcattcagt
gagaatgcccctgaaatgctgaccatggttagccatgctgttccaagtgttggtgagcat
ccagttcttggcatcgggactgatatcagaacgatcttcactggtccaagtggcgcagca
ttgcagaaagccttggggtttggggaggtttctctgttaaatcctgtccttgttcactgc
aaaaattctgggaagccattttatgcaattgttcatagggttacaggtagcttaatcatt
gattttgagcctgtgaagccctatgaagttcccatgactgctgcaggggccctgcagtca
tataaacttgcagccaaagccattactcgcttgcagtccttgcccagtggcagtatggaa
agactttgtgacacaatggttcaggaggtttttgaactcacaggttatgacagggtgatg
ggatataagtttcacgatgatgatcatggagaggtggtgtctgagatcacaaagcctggc
ctcgagccttaccttggtttacattatcctgctacggatattccacaggctgcacggttt
ttgtttatgaagaataaggtccgaatgatttgtgattgccgagcaaaacatgtgaaggta
gtccaagatgagaagcttccatttgacttaacattgtgcggctctactcttagggcccct
cactactgccatttacagtatatggagaatatgaattcaattgcatcacttgtaatggca
gttgtggtcaatgacggggatgaagaaggagaaagctctgattcttcacaatctcaaaaa
agaaaaaggctatggggcctggttgtttgccacaacacgaccccaaggttcgtccccttt
ccactgaggtatgcatgtgagtttcttgcacaagtctttgccatacacgttaacaaggaa
ctggaattggaaaatcaattccttgagaaaaatattctgcgtactcagactctcttgtgt
gatatgctgatgcgagatgctcccgtaggtatcgtgtcacagagccccaacattatggat
ctcatcaaatgtgatggtgctgctttgctctataagaataagatacatcgattaggaatg
aacccaagtgactttcagctgcatgatatagtatcatggctttgtgagtatcatacagat
tccacaggcttgagtacagatagcttgtatgatgctgggtttcctggggctcttgctctt
ggtgatgcagtctgtggtatggcggctgtaagaatatctgataaggactggctgttctgg
tacaggtcacacactgctgctgaagttagatggggtggtgcaaagcatgaacctggtgag
aaggatgatggcaggaaaatgcatcctaggtcatcattcaaagcattcctggaagttgtc
aagacaaggagtataccctggaaggactatgagatggatgcaatccactccttgcagctc
atactaagaaatgctttcaaggatgctgatgctgtgaattctaatacaatttccatccat
acgaagcttaatgatctaaagattgatggaatgcaggaacttgaagcagtgacagctgaa
atggtccgcttaattgaaacagcttcagttcctatattcgcagttgatgttgatgggcag
gttaatggatggaacacaaaagttgctgaattaactggtcttcctgttgatgaagcaatt
gggaaacatctgctcactctcgtggaggattcatcagttgataccgtgaataagatgttg
gaattagcattgcaggggaaagaggaaagaaatgtagagtttgaaataaaaacacatggg
ccgtcgagggattctagtccaatcagcttaatcgtgaatgcatgtgcaagcaaagatgtt
cgggatagtgttgtgggtgtgtgttttattgctcaggatataactggacaaaaaagtatc
atggacaagttcacccgaatcgaaggtgactatagagcgattatccaaaatcctcaccca
ttgatcccaccaatatttggcactgatcaatttggctggtgttctgaatggaactctgcg
atgaccaagttaactggatggcggcgtgatgatgttatggataaaatgctgctaggggag
gtttttgggacacaggcagcttgctgccgtctcaagaatcaagaagcttttgtgaatttc
ggagttatactaaataatgctatcactggtcaagaatctgagaagattccttttggtttc
tttgcacgttacgggaaatatgtggagtgcttactctgtgtgagcaaaaggttagataaa
gagggtgcagtcacgggactcttttgtttcctgcagcttgcaagccatgagttgcaacaa
gctcttcatgttcaacgattatcagaacaaactgcattgaaaaggttgaaagtattagct
tacataaggaggcaaattaggaatcctctttctgggattatattctctcggaagatgcta
gaggggactagcttgggcgaagagcagaaaaatatactgcatacaagtgcacagtgtcag
cgtcagctcaacaaaattcttgatgatacagatcttgatagcatcatagagggttatttg
gatctggagatgctcgagtttaagctacatgaggtattggtagcatccataagtcaagtc
atgatgaagagcaatggaaagaatataatgatctcgaatgacatggttgaagatcttctt
aatgaaactttatatggagatagtccgagacttcaacaagtcctagctaactttttgtta
gtatctgtgaactctacaccaagtggtggccagcttagtatttcaggcaagctaactaaa
gatcgcataggagaatctgttcagcttgctctcttggaattcaggataagacatacaggg
ggtggagtgccagaagaattgcttagccaaatgtttggtagtgaagccgatgcatctgaa
gaagggatcagcttacttgtcagcagaaaactggtcaagctgatgaatggggaagttcag
tacctaagagaggcggggcgatcaactttcattatatccgttgaactcgcagtggctacc
aaatcaagctga
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