Solanum stenotomum: 125864427
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Entry
125864427 CDS
T08385
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125864427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125864427
Membrane trafficking [BR:
sstn04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
125864427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
HEAT
Beta-prop_EML
Beta-prop_TEP1_2nd
HEAT_EZ
HEAT_2
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
125864427
NCBI-ProteinID:
XP_049400382
LinkDB
All DBs
Position
5:complement(54980220..55024862)
Genome browser
AA seq
1343 aa
AA seq
DB search
MALGDLTISQLSAVAEESADHEDGDRNNDGSFDVVAAENEMTMTTTETSMAYVPQFVWFR
ELRHDEFEAYVPTAPANTGLVSKWRIKDRMKTGCVALVLCLNISVPPPDVIRVSPCAQMQ
CWIDPHSMPPQRALETIGRTLLEQYERWQPKARYKISLDPTIDEVKKLCTTCRNYAKSER
VLFHYNGYGVTKPSVNNEIWLFNKSYTQYIPLRISDLDSWLKTPSIYVFDCSAAGVIVNA
FIELQNLAASNSSGPSTRDCILLAACEAHETLPQSAEYPADIFTSCLTTPIKMALRWFCT
RSLFCESFDYSLIDRIPGRQTDRKTPLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLL
VASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHMWDAWDMAAEICLLQLPTLLADPSV
EFQPSSFFTDQLTAFELWLDYGSENKKPPVQLPVVLQVLLSQSHRFRALVLLGRFLDMGP
WAVDLALSVGIFPCVLKLLQTTTPELRQILVFIWTKILAFDKSCQVDLVKDGGHAYFIRF
LDSVEAYPEQRAMAAFVLAVIADGHRRGQEACIEVGLINVCLKHLQGSTYNDIQTEPLFL
QWLCLCLGKLWEDFTEAQVLGLQADAPAIFVPLLSQSQPEVRAASIFALGTLLDVGFDTS
KDDIGENEDYNNEEKIGAEVIMKSLLSVVSDASPLVRAEVAVALARFAFGHKVHLKSVVA
AYLKSQSNSMPTSLPSSMVKSSGSGYTTPTYYVPHGSVVPSPNAPLWRVGGDSPSISHDG
RVSTSSPVATPGFMHGSPLSDGSSHHSDSGRLGDAASDGVVNHIRPRPLDNSLYTKSVQA
MCALAKDPSPRVAGLGCRVLSIIGIDQVFAKSTVESTTSPGPRSARLNRSSSWFDMSGGR
RLPVPFRTPPVSPPQSSFLTGLRRVYSLDFRHHPMNTQDSALADPLLGSGGSSRASERSS
IPHSTIYNWSCGRFSKPLLTAADDNEEIISRREEKEKLALDLITKCQHCSVNRLHNQIAS
WDTKFESGTRTALLHPFSPFVIASDESERIRVWNYKESTLLNSFDNHGYPDKGISKICLV
NELDESLLLVASSDGNIRIWKEYTARGQQKLVSAFSSIQGLRPGSRRVNAVVDWQQQSGY
LFASGKISSIMAWDLDKEQLVNTSPIYSDCSISALSASEVHVGQFGAGFVDGSVKLFDIR
MPEMPVCSTRPHPKVERVVGVCFQPGLQPAKVVSASQAGDIQFLDMRNLKEAYLTIDAHR
GSLTSLAVHRHAPLIASGSSKQLIKVFNLEGQQLGTIRYLSTFMAQKIGSVRCLTFHPYQ
VLLAAGATDACVSIYADEISPPT
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatttgacgatttctcagttatcagctgttgcggaggagtctgcggat
catgaagatggcgataggaacaatgatggtagctttgatgttgttgctgctgaaaatgag
atgacgatgacgacgacagagacaagtatggcttatgtaccgcaatttgtatggtttcgt
gagcttcgtcatgatgagtttgaggcgtatgttcctactgcaccggctaatactggtttg
gtctctaagtggcggattaaggaccggatgaagacgggatgtgttgcccttgttttgtgt
ttgaacattagcgttcctccaccagatgtaataagggtatctccttgtgctcagatgcag
tgttggattgatccacattctatgccacctcaaagagcccttgaaacaattgggagaacg
ttgctcgaacaatatgagaggtggcaacctaaggcacgctacaagatctccttggatcct
actatcgatgaagttaagaaactttgcacaacatgtcgaaactatgccaagtcagagcga
gttcttttccattacaatggatatggtgtaaccaaaccatcagtcaataatgaaatttgg
ctatttaataagagttatacgcagtatatcccattgcggatcagtgacctggactcttgg
ttgaagacaccttcaatctatgtgtttgactgctcagctgctggggtgatcgttaatgcc
tttatagagctccaaaacttggctgcctctaattcctctggaccttctacaagagattgt
attctgctcgctgcctgtgaagcacatgagacgcttcctcagagtgctgagtatcctgct
gacattttcacttcctgcctcacaacgccaatcaaaatggcattgagatggttttgcacg
cggtcattattttgtgagtcatttgattattctctgatagatagaattcctggccgccaa
acagatcgaaagacacctcttggtgaattgaattggattttcactgcagtaactgataca
attgcctggaatgttctaccacacgatctatttcagagattgttcaggcaagacctatta
gttgctagtttgttcagaaattttttacttgctgaaagaatcatgcgctctgcaaattgt
tcaccaatttcatacccaatgctaccacctactcatcagcatcacatgtgggatgcttgg
gacatggcagcagaaatctgccttttgcagcttccaactttgcttgctgatccaagtgtt
gaatttcagcctagctcattcttcaccgaccaattgacagcttttgagctatggcttgac
tatggatcagagaataaaaagccaccagtgcagttgcccgttgtgctacaggtgttactt
agtcaatcccaccggtttcgagcactggttcttctcggaagatttcttgatatgggacct
tgggctgtagatctggccttgtctgttggaatatttccttgtgttctaaagcttttgcaa
accacaactccggagcttaggcaaattcttgtcttcatttggacgaagatccttgccttt
gataagtcttgccaggttgaccttgttaaggatggtggacatgcatatttcattagattt
ctcgacagcgttgaggcttatccagagcaaagggcaatggctgcatttgtcttggcagta
attgctgatggtcacagacggggtcaggaggcgtgtattgaagtgggccttattaatgtc
tgcttgaagcatcttcagggatcaacctataatgatatccaaactgaaccattgtttctt
caatggctgtgcctttgtctgggaaagctctgggaggatttcacagaggcgcaagtacta
ggtttgcaggcagatgcaccagcaatatttgtgcctctactttctcaatcgcagcctgag
gtacgagctgcatctatatttgcactaggtactttacttgatgttgggtttgatacatct
aaggatgacattggagagaatgaagactacaacaatgaggaaaagattggggcagaagtc
ataatgaagagccttttaagtgttgtatctgatgcaagccctttggtacgagctgaggtt
gctgttgccttggcacgttttgcctttgggcataaggtgcacctgaagtcggttgtagct
gcatatttgaagagtcaatctaattccatgcccacttccttgccttcttctatggtcaag
agttcaggtagtggctatacgacgccaacttattatgttccacatggaagtgtagttcca
tctcctaatgctcctttatggagagtgggaggtgacagtccgtctatctctcacgatggt
agggtctcgactagcagccctgttgcaacacctggcttcatgcatggatctcctttgtct
gatggttcttctcatcattctgattctggaagactgggtgatgctgctagcgatggtgtt
gttaatcatataagacccagaccacttgacaattcactctatactaagtctgtgcaggcc
atgtgtgccctggcaaaggatccatcacctcgtgttgcaggtcttggctgtagagtgctt
tcaattattgggattgaccaagtgttcgccaagtcaactgttgaatccacaacatctcct
ggccctagatctgctcgattgaatcgatcatcttcttggtttgacatgagtggaggtagg
cgtttacctgtgccttttaggactcctcctgtcagtcccccccagtccagtttcttaacg
ggattgcgaagagtttattctttagacttcaggcatcacccaatgaacactcaagactca
gcgttagctgatcccctcttgggttctggtggatcttctagagcttcagaacgcagttct
attccacactcaaccatttataattggagctgtggccgtttctcaaagccacttcttact
gcagctgatgataatgaagagatcatttctaggagagaagagaaggagaagttagctctt
gacctcatcaccaaatgccagcactgttcggtgaacagactgcataatcaaattgccagt
tgggatacaaagtttgagagtggtaccagaactgctttgctgcatcccttctcaccattt
gtgattgcttcagatgagagtgaacggatcagggtctggaattacaaggagtctaccctt
ctgaacagcttcgacaaccatggttaccctgataaaggaatttcaaagatttgcctcgtg
aatgagcttgatgagagtttgctccttgttgcttcaagcgatggcaacatacggatttgg
aaagaatatactgcaagaggtcaacagaaactagtttctgcattctcttcaattcaaggt
ctcagaccaggttctcgccgtgtgaatgctgttgtggattggcaacagcaatctggatac
ctgtttgcatcaggtaagatttcttctatcatggcttgggatcttgacaaagagcagctt
gtaaatacttctccgatatactcggattgcagcatctcagcattatctgcttctgaagtt
cacgtgggtcaatttggtgcaggattcgtggatggatctgtcaaattatttgatattcga
atgccagaaatgcctgtttgttcaacacgacctcatcccaaagttgaaagagttgttggg
gtttgctttcaacctggacttcaaccagcaaaggttgtcagtgcatctcaggctggtgat
attcagttcctcgatatgagaaatctcaaggaggcttacttgaccattgatgctcacagg
ggatcacttacatctctggcggtacatcgtcatgcaccccttatagcaagtggttcatca
aagcaacttatcaaagtgttcaacctggagggtcagcagttaggcaccattagatatttg
tccaccttcatggctcagaagataggatctgtaagatgtcttaccttccatccctatcaa
gtgctgcttgctgctggtgcaacagatgcttgtgtttctatctatgctgatgaaatttcc
ccaccaacataa
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