Solanum stenotomum: 125864611
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Entry
125864611 CDS
T08385
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125864611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125864611
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125864611
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125864611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125864611
NCBI-ProteinID:
XP_049400590
LinkDB
All DBs
Position
5:complement(782561..790499)
Genome browser
AA seq
1153 aa
AA seq
DB search
MGYDSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRT
EIKKIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIY
VTIDYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFV
IKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMF
KTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESD
KMLKMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKD
AMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVK
DSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGP
RALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSP
EELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASD
GGRVCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEK
EATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGL
LYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGR
CIVMKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKE
SPTVTRTPVTSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTR
RPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGS
KAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFM
GPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLI
YERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQ
SMNIVPRLKLAEA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggttatgattctaccatgtccaatacgacagaggactcaaaccagggaattgacaag
cagcaccttgcttctcccattaagaatttggtggacaagtatcaacttgttccagaattc
ctaaaggtgagaggtttggtgaagcaacacttggactccttcaattattttgttaggaca
gaaataaagaagattgtccgagcgaatcaggagattagatcaacattggaccccaatatt
tatcttaggtacagggatgtccacattggtgaaccatcaatggtttttgatgctgtaact
gagaaattatgtccacagaaatgccgactatctgaccgtacctatgcggcaccaatttat
gtcaccattgactacacgacaggaagtcatgggcaaacatcagtgtcaacaaagaagaat
gttatcattggaaggatgccaattatgcttagaagcagttgttgcgtgctatatgggaaa
gatgaagatgaactagcaagacttggagaatgcccacttgatcccggaggatattttgta
atcaaaggcactgagaaggtaattttaattcaagagcagctctcgaagaacaggataatc
attgatacagataaaaaaggttctgtacaagcatctgttaccagcagcacagaaaaaaca
aagagcaaaacaattataaaaatggagaaagaaaaggtatacttagagttgaatatgttc
aaaaccaaggtccccataatggttgtcatgaaggctatgggaatggagagcgatcaagag
gttgtgcaaatgataggaagagatcctcggtttagtgctctgcttttgccatcaatcgag
gagtgtgcagatctcaagttgtatacacaacatcaagcactggagttcctcgagagtgac
aagatgcttaaaatgccttcatattctactggcccagttgagaagggagcccgagctttg
agtattcttcgtgacatatttcttgcaaatgttccagtccatcaacataatttccgcaaa
aaatgcatatatgttgcagtaatgatgaggcgcatgatggaagcaatcttaaacaaggat
gcaatggatgacaaggactatgtggggaacaagagattggagctgtctggtcagctacta
tctctcctttttgaagatttgttcaagacgatgaatgatgaagctaggaggacaatcgat
actcttctagccaggccaagtcgctccagtcgtttggacatttctcaatacatagtcaaa
gatagtattactatgggcctggagagaaccctatctacaggcaattgggatgttaaacga
tttaggatgcacaggaagggcatgactcaggttgttgctaggctatcatacattggatca
ttgggtcacatgacaaagatctcaccacaatttgaaaagtctagaaaagttagtggtcct
agagcactgcaacctagccagtttggcatgctttgcccttgtgacacaccagaaggtgaa
gcttgtggattggtgaaaaacttggccttgatgactcatgttacgacggatgaggatgag
cgcccgatcatgtctttgtgctactgcttgggtgttgaggacttggaacaactttcgcca
gaagaacttcacatgccaacgtcctatcttatcacattaaatggacttattctaggcaaa
cacaagagtcctcagcgatttgctaatgcaatgaggaggctacggagggctggtaaaatt
ggggagtttgtaagcatctttgtgaatgaaaagcagcgttgtgtctacattgcttcagat
ggtggacgtgtttgtcgtccgcttgtcattgctgacaaaggtgtttccaggatcaaagag
caccacatgagagagttgagggatggtgtgcgtgacttcgacagctttctaaaggatggt
ttgatagaatatcttgatgtcaacgaggagaacaacacattgattgctctatacgaaaag
gaggcgacaccagagacgacacatattgagattgagcctttcacaatcttaggtgtttgt
gctggtttgataccttatcctcatcacaatcagtcccccaggaatacctatcagtgtgct
atgggtaagcaagctatgggaaacattgcctataaccagttgaatcggatggatggtttg
ctctaccttttggtgtatcctcaacgccctttactgactacaagaacgatcgagctggtt
gggtatgataaactaggggctggtcagaatgcgactgttgctgtgatgagttatagtggc
tatgacattgaggatgcaatagtaatgaacaagtcttctttagatcgaggttttgggcgt
tgcatagtgatgaaaaaatattcagccatatgtcagaagtatgagaatggcacatcggat
agaataattaaaccacagcgtcaaggatttgaagctgataagatgcaaattctggatgat
gatggaatggctgctccaggagaaactattcgaaatcatgatatctatatcaacaaggag
tcccctacagtcacgaggactccagtcacgtctcctatgggtttgccagatagtgcatac
aagacaagtagacaaacttataaaggtcctgaaggggagacagctgttgttgatagagtg
gctctttattctgatagaaacaacaatttaagcatcaaatttatgatccgtcatacccgt
aggcctgagattggtgacaaatttagtagtagacatgggcagaaaggagtctgtggcacc
attgtacaacaggaagattttccattttctgaacgtggcatttgccctgatcttattatg
aatcctcacggatttccaagccgaatgacagtgggaaagatgattgagctccttggaagt
aaagctggagtttcatgtggtaggtttcattacgggagtgctttcggagaacccagtggt
catgcagacacagttgatgctatcagtgaaactctggtaaagcatggatttagctacaat
ggcaaggattttatttattcaggcattactggtatgccactacaagcatacattttcatg
gggccaatatattaccaaaagcttaaacacatggtcctagacaaaatgcatgcccgtggg
agtggacctcgtgttatgatgacaagacaacctaccgaagggaggagtagaaatggaggt
ttacgtgtgggagaaatggaacgtgattgtttgattgcatatggtgccagtatgttgata
tacgagcgcctgatgatttccagtgatccattcgaggttcaggtttgccgaaaatgtggt
ttattgggatattacaactacaagctgaagactggcatttgttctatgtgcaagaacggg
gaaaatatatctacgatgaagttgccttatgcatgcaaactcctatttcaggagctccaa
tcaatgaatatcgtcccacgattaaaacttgccgaggcctga
DBGET
integrated database retrieval system
