Solanum stenotomum: 125864612
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Entry
125864612 CDS
T08385
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125864612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125864612
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125864612
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125864612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
125864612
NCBI-ProteinID:
XP_049400591
LinkDB
All DBs
Position
5:complement(796237..800194)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSMDCDSTMSSQSNNLSNGIDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLV
KTDIKKIVRANHEIRSSTRDPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAA
PIFVTVDYTMTRNGQISMLTQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGG
YFIVNGREKVILIQEQLSKNRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLEL
NMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRYSALLLPSIEECADLKLFTQHQALEFL
ESDKMLTMPSYYTAPVEKGARALSILRDMFLAHVPVNQHNFRKKCIYVAVMMRRMMEAIL
NKDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEVRREFDASSKSSDLLYHVKKSNR
ITVELQRTLSTGNWDIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRA
LQPSQFGMICPCDTPEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAE
LHTPNSYLIILNGLILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGG
RVCRPLVIAEKGVSRIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEA
TPDTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLY
LLVYPQRPLLTTRIIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
VMKKYAAICQKYKNLTSDRLIKPQRQGNEAEKMQILDDDGLASPGEIIRNRDIYINKESP
TVTITQVTSPMGLPDSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRP
EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA
GVSCSRFHYGSAFGESSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGP
IYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHE
RLMLSSDPFEAQVCRKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSM
NIVPRLKLTEA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggattgtgattctactatgtccagtcagagtaacaacttgagcaacggaatt
gacaagcagtaccttgcttctcctattaagaattcggtggacaagtatcaacttattcca
gaattcctaaaggtgagaggattggtgaagcaacacttagcctcgttcaattacttggtt
aagacggatataaagaagattgtacgtgcaaatcatgagattagatcaagtacacgcgat
cctaatatctatcttaggtacagagatgtccgtattggtgaaccatcgatgacttatgat
ggtgtaagggagaaactaagtccacaaaaatgtcgactagctgaccttacctatgcagct
ccaatttttgtcacagttgattacacaatgacaaggaacgggcagatatcaatgttaacg
cagaaggatgttgtcattgcacgaatgcctattatgctaagaagttgtttgtgtgtgctt
tatgagaaagatgaagaacaactagcaaaacttggggaatgtccacttgatccgggagga
tattttattgtcaatggcagagagaaggtaattttaattcaagagcagctctcgaagaac
aggataatcatcgatacagatagaaaaggttgtgtacaagcatctgttatctgcagcaca
gaaaaaacaaagagcaaaacaattataaagatggagaaagaaaaggtatacttagagttg
aatatgttcaaaaccaaggtccccataatggttgtcatgaaggcaatgggaatggagagt
gatcaagaggttgtgcaaatgataggaagagatcctcggtatagtgctttgcttttgcca
tcaatcgaggagtgtgcagatctcaagttgtttacacaacatcaagcactggagttcctc
gagagtgacaagatgcttacaatgccttcatattatactgctccagttgagaagggagcc
cgagctttgagtattcttcgtgacatgtttcttgcacatgttccagtcaatcaacataat
ttccgcaaaaaatgcatatatgttgcagtaatgatgaggcgcatgatggaagcaatctta
aacaaggatgcaatggatgacaaggactatgtggggaacaaaagattggagctctccggt
cagctactatctctcctttttgaagatttgttcaagacgatgaatgatgaagttaggagg
gaatttgatgctagctccaaatcttccgacctgttatatcatgtaaagaaaagcaacaga
attactgttgaattgcagagaaccctatctacgggcaactgggatattaaacgatttagg
atgcacaggaaaggcatgactgaggttcttgctaggctatcatacattggaacattgggc
tacatgacgaagatcaaaccacaattcgagaagtctagaaaagttagtggtcctagagca
ctgcaacctagccagtttggcatgatctgcccttgtgatactccagaaggtgaagcttgt
ggattggtgaaaaatctggccttgatgactcatgttacgacagatgaggatgcgcgccca
attatgtctttgtgctacgacttgggtgttgaggacttggaacaactttcagcagcagaa
cttcacacgccaaattcttatctcatcatattaaatggacttatcctagggaagcacaag
agtccccagcgttttgctaatggaatgaggaagctacggagggctggtcgaatcagggag
tttgtaagcatctttgtgaatgataagcagtgctgtgtctacattgcttcagatggtgga
cgtgtctgtcgtccacttgtaattgctgaaaaaggtgtttctaggatcaaggagcaccat
atgaatgagttgagggatggtgtgcgtgacttcaacagctttctaagagatggtttgata
gaatatcttgatgtcaacgaggagaacaactcattgattgctctatacgaaaaggaggca
acaccagatacaacacatattgagattgagcctttcacaatcttaggtgtttgtgctggt
ttgataccttatcctcatcacaatcagtcccctaggaatacctatcagtgtgcaatgggt
aaacaagctatgggaaacattgcctacaaccaattgaatcggatggatggtttgctctac
cttttggtgtatcctcaacgccctttactgactacaagaataattgagttggttggatat
gataaactaggcgctgggcagaacgctactgttgctgtgatgagttatagtggctatgac
attgaggatgcaatagtaatgaacaagtcttctttagatcgaggttttgggcgttgcata
gtgatgaaaaaatatgcagccatatgtcagaagtataagaatctcacatcagataggcta
attaaaccacaacgtcaaggtaatgaagcagagaagatgcaaattctggatgatgatgga
ttagcttccccaggagaaattattcgaaatcgtgatatctatatcaacaaggagtcccct
acagtcacgataacacaagtcacatctcctatgggcttgccggatagtgcatataagtca
agtagacaaacttataaaggtactgaaggggagccaactgtcattgacagagtggctctt
cactctgatgaaaacaacaatttaagtatcaaatttatgatccgtcagacccgtaggcct
gagattggtgacaagtttagtagcagacatgggcagaaaggagtctgtggcatcattgta
caacaggaagatcttccgttttctgaacgtggcatttgccctgatcttattatgaatcct
cacggatttccaagccgaatgacagtaggaaagatgatcgagcttcttggaagtaaagct
ggagtttcgtgtagtaggtttcattatggcagtgctttcggagaatccagtggtcatgca
gatacggttgatgctatcagtgaaactctggtaaagcatggatttagctacaatggcaag
gatttcatttattcaggcattactggtatgccactacaagcatacatcttcatggggcca
atatattaccaaaagctgaaacacatggtcctagacaaaatgcatgctcgtgggagtgga
cctcgtgttatgatgacaagacaacctaccgaagggaggagtagaaatggaggtttacgt
gtgggagaaatggaacgtgattgtttgattgcatatggtgcaagtatgttaatacacgag
cgcttgatgctttccagtgatccattcgaagctcaggtttgcagaaaatgtggtttattg
ggatattacaactacaagctgaagattggcatttgttccatgtgtaagaacggggaaaac
atgtctactttgaagttgccttatgcttgcaagctgctattccaggagctccaatcaatg
aacattgttccacgattgaaactaacggaagcttga
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