Solanum stenotomum: 125864639
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Entry
125864639 CDS
T08385
Name
(RefSeq) vacuolar protein sorting-associated protein 22 homolog 1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125864639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125864639
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125864639
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
125864639
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125864639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
HTH_24
DnaD_N
CDK5RAP3
TrmB
MarR_2
DUF4423
Spore_III_AA
DUF3631
Motif
Other DBs
NCBI-GeneID:
125864639
NCBI-ProteinID:
XP_049400623
LinkDB
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Position
5:complement(2163137..2167548)
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AA seq
251 aa
AA seq
DB search
MRRRPGIGGLQNAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKN
PAFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCLATRPHNGGLISL
DDLCKLLGQRRKAVRETISEDDCLRAISKLKVLGSGFEVITVGKRKLVRSVPTELNKDHN
EILELAQAQGFVTVDEVQRRLNWSSGRATDALETLLEEGLAMIDDGHRDGKRRYWFPCVS
SVSSYVGADTL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagaccgggaatcggaggtctgcagaacgccgcggcggctagggatcaatat
cgattgttaggggaaaatgttgcgaaattgagaacagatcttatgaaagagcagctcgct
acttttcgatctcagcttgaagatttcgctcgcaaacacaagaatgacattcgcaagaac
cctgcattcagggcacagttccacgagatgtgtgctaaagtcggagtagatcctctagca
tcaaacaagggtttctgggcagaactgttggggattggtgacttctattatgaacttggg
gtacagattattgaggtttgcctagcgactagaccccacaatggaggtttgataagcttg
gatgatctttgtaaactgcttggtcagagacggaaagctgtgcgcgagacaatatctgaa
gatgactgcttgcgtgctataagcaaactgaaggtattaggtagtggttttgaggtgatt
acagtgggaaagagaaagcttgttagatctgtccctaccgaactgaataaggatcacaat
gaaatattagagctggcccaggctcaaggttttgtgactgttgatgaggttcaaagacgc
ctaaactggtcttcaggtcgtgcaactgatgcgcttgaaacactgttagaggaagggctt
gccatgatcgatgatggacatagagatggcaaacgtcgatactggttcccttgtgtgtcc
tctgtctcctcctatgtaggtgcagacactctttag
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integrated database retrieval system
