Solanum stenotomum: 125864680
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Entry
125864680 CDS
T08385
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125864680
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125864680
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125864680
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125864680
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125864680
Ion channels [BR:
sstn04040
]
Chloride channels
Chloride channel (CLC)
125864680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
125864680
NCBI-ProteinID:
XP_049400667
LinkDB
All DBs
Position
5:complement(20943883..20948901)
Genome browser
AA seq
776 aa
AA seq
DB search
MENQVDIENDGGMIEEEKFDLERNFSTISESGSIRVPLLKSKSRVNNTSQIAIVGANVYP
IESLDYDIVENDLFKQDWRSRKKVEIFQYIFLKWTLVLLIGLSTGLVGFFNNIGVENIAG
FKLLLTSNLMLDGKYFQAFAAFAGCNVFFATCAAALCAFIAPAAAGSGIPEVKAYLNGID
AHSILAPTTLLVKIFGSILGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLK
YFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEIASWWRSALLWRTFFTTAIVAMV
LRSLIQFCRGGNCGLFGQGGLIMFDVNSGVSNYNTIDVLALIFIGVLGGLLGSLYNYLVD
KVLRTYAVINERGPAFKILLVMSVSILTSCCSYGLPWFAGCIPCPVGLEEKCPTIGRSGN
YKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSNNSNEFHISTLLIFFAGVYCLGIITYGI
AIPSGLFIPVILAGASYGRIFGRALGSLSNLNVGLFSLLGAASFLGGTMRMTVSICVILL
ELTNNLLMLPLVMLVLLISKTVADIFNKGVYDQIVKMKGLPFLEAHAEPFMRNLVAGDVC
SGPLLSFSGVEKVGNIVHALKYTRHNGFPVIDEPPFSETPELCGLVLRSHLLVLLNGKKF
TKQRVLSASNILSRFHAFDFAKPGSGKGLKFEDLVITEEEMEMYIDLHPITNTSPYTVVE
TMSLAKAAILFRQLGLRHLCVVPKKTGRAPIVGILTRHDFMHEHISNLYPHLVPHK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaagttgacatagagaatgatggagggatgattgaagaagagaaatttgat
ttggagagaaatttttcaacaatttcagagagtggtagtataagagtgcctttgctcaaa
tcgaagagcagagtcaacaatacctcccaaatcgctattgttggagccaatgtttatccc
attgaaagcctcgactatgatattgtagaaaatgaccttttcaagcaagactggagatct
aggaaaaaggttgagatatttcaatatatatttctcaaatggactcttgtgctccttatt
ggattgagtactggacttgttggtttctttaataacataggagtggaaaatattgctggt
ttcaagcttcttctcactagcaacttaatgcttgacggaaagtatttccaggcatttgct
gcttttgccggttgcaatgtgttttttgcaacttgtgccgcagccctctgtgcatttatt
gcacctgcagctgcaggctctggtatacctgaagtaaaagcatatctaaatggtatcgat
gctcattccattttggctccaactacattacttgtcaagatctttggatccattttgggt
gtttctgctggatttgttgttggcaaggaaggacccatggtccatactggtgcttgcata
gcaaacttacttggacaggggggttcccgaaagtatcatttaacttggaaatggctaaaa
tacttcaaaaacgaccgtgatcgtagggatttgatcacttgtggtgccgctgctggtgtt
gcagctgctttccgtgccccagttggaggagttctttttgctcttgaggaaatagcatca
tggtggcgaagtgctttactttggaggactttcttcacaactgccatcgttgctatggtt
ctcagatctctcatacaattctgtcgcggtgggaactgtggactatttgggcaaggaggt
ttgataatgtttgatgtcaattcaggagtatctaattacaacacaatagatgtattggca
cttatctttattggagtacttggaggtcttctgggaagcctttataactatcttgtcgac
aaggtccttcggacttacgccgtcattaatgagagaggtcctgctttcaagatcttgctt
gtcatgagtgtttctatcctgacttcttgttgctcttatggcctaccatggtttgcaggg
tgcattccatgtcctgtaggcttggaggaaaagtgcccaactataggtcgctctggaaac
tacaagaatttccagtgtccagcagggcattacaatgatcttgcatcactctttctgaac
accaatgatgatgccatccgcaatttgtttagttcaaataattcaaatgaatttcacatc
tctactcttctaatcttctttgctggtgtatattgccttggcattataacatatggaatt
gctattccttctggactcttcattcctgtcatacttgctggagcctcctatgggcgtata
tttggtagagccttgggttcgttgtccaatcttaatgttggtctgttttcgctacttggt
gctgcctctttccttggtggtaccatgagaatgacagtatcaatatgtgtcatactcctt
gagcttacaaacaatctactaatgcttccattggtgatgcttgttctcctcatatcaaaa
actgtggctgatatttttaataagggtgtctatgaccagattgtgaaaatgaaaggtttg
cctttcttggaagcacatgctgaaccatttatgaggaatttggttgccggagatgtctgt
tctgggccattattgtcattttcaggtgtggagaaggtggggaacatagtacatgctttg
aagtatactaggcataatggctttcctgtgattgatgagccacctttctcagagacacca
gagttatgtgggcttgttctacggtcacatttacttgttttgctcaatggaaagaaattc
acgaaacaacgtgtattgagtgcctccaatattttgagtaggtttcatgcatttgatttt
gctaagccaggatcaggtaaggggcttaagtttgaggatctcgtcatcacggaagaggag
atggaaatgtatattgatctccatcctataacaaatacatccccatacacagtagtggag
accatgtctctggccaaagctgcaatccttttccgacaacttggtcttagacacttatgt
gttgtcccaaagaaaactgggagggctccaatcgtcggaatcttaacaaggcatgacttc
atgcatgagcatatatctaacctctacccgcatcttgtcccccacaagtag
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