Solanum stenotomum: 125864682
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Entry
125864682 CDS
T08385
Name
(RefSeq) myosin-2-like isoform X1
KO
K10357
myosin V
Organism
sstn
Solanum stenotomum
Pathway
sstn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125864682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125864682
04131 Membrane trafficking [BR:
sstn04131
]
125864682
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125864682
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sstn04812
]
125864682
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125864682
mRNA cycle factors
P-body specific factors
125864682
Membrane trafficking [BR:
sstn04131
]
Others
Actin-binding proteins
Myosins
125864682
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125864682
Cytoskeleton proteins [BR:
sstn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125864682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
SH3_VIII-1_N
IQ
Myosin_N
nSTAND3
Zeta_toxin
AAA_22
FN3_DSCAM-DSCAML_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125864682
NCBI-ProteinID:
XP_049400670
LinkDB
All DBs
Position
5:complement(2640669..2653257)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSSVSETSRTLSSLEEMLEALKQRDENEKPKDCPPALPFRPKLASRTRPPSPKRSMPSTP
EKRDIELENGKREEEFKGKLGNVFGAKMCKEVDSSSESPYVNSSAQKEYRQRFWENDGAN
LDNKLPYSLPKFREDEWDDNISYFIEKKLRVWCHLKNRQWEPGQVQSTSGDKASVLLSDG
SVVAVPVEELLPANPDILQGVDDLIQLCYLNEPSVLHNLQYRYAQDRIYTKVGPVLIAVN
PFKEIQLYGSKLVTAYKKKLLDSPHIYSIAETAYSQMMEDEVNQSIIISGESGSGKTETA
KFAIEYLVMISGGNNHVESELLQTSCILEAFGNAKTLRNNNSSRFGRLIEIYFSAEGGIC
GTNVQAFLLEKSRVVQLAHGERSYHIFYQLCAGAPSALRDKLKLTGASEYNFLNQSNSLV
IHNVDDAKKFHVLVKALNTAGISERDQEHAFQMVAAVLWLGNITFAAIGNGNNVEVVQCE
AVINAASLMGCSANDLMLALSTREIQAGKDKVVKSLTMQQAIDTRDAMAKFIYANLFGWI
VDKINRSLAMGKEKTGRSINILDIYGFESFEKNSFEQFCINYANERLQQHCYRHLFKLEQ
EEYELDGIDWTKVDFQDNQECLDLFEKKPIGIISLLDEESNFDKATDLAFANKLKQHLKA
NPCYRGDREEFGVRHYAGEVIYDTSDFLNKNRDTVHPDTIQLLSSSSEDLLKLFASSFAN
QSKKTASSIHIEISDFQKQTVATKFKDVLFKLMQQLESTAPHFICCIKPNNKQVPGMYNN
DLVFEQLRSYSLLEVVRISRSGYPTRMTHQEFCIRYGVLLPEDHERKDPLSMSVSILRQF
DILPEMYQVGYTKLYFRAGQIAVLEDVRKQVLQGTLEVQKCYSGPHARRHFHELKGVVII
LQSFVRGEIARRQYKYSLESKQKDANKENDEQLVAVLQIQSAIRCWLAQRHLNQLQKSKK
LIQDRPKPAKKTTEVKQDLPAEILPSVVEDLERRVLVAEATLEEKEKENAALKEQVNQLE
SRWSDYEVRMRSMEEMWQKQMASLQASLVSAKKSLGVDNSAGQPGKPEGSPSPCGYESED
TTTTMGTRTPGGSTPIEYASNGVDFGGIREINGGLCVVNYLSREFELRKQNFDDEAMAIS
QLKSGQLQSTSPAEDFRRLRHKFDEWKKDYKARLKETKSKVHKLGYSEAEKTRRNWWGKK
SKR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggtttcagaaacttctagaactcttagttctctggaagaaatgctggaagcc
cttaagcaaagggacgagaatgagaagcctaaagattgcccaccagcattaccatttagg
ccaaagttagcttcgagaactaggcctccttctccgaagagatcgatgcctagtacaccg
gaaaagcgtgacattgaattggaaaatggcaaaagagaagaagagtttaaagggaaacta
ggtaatgtgtttggagccaaaatgtgtaaagaggtggattctagtagtgagtcaccttat
gttaattcatcagctcaaaaggaatatagacagagattttgggaaaacgatggtgctaac
cttgataataagcttccttattctctcccaaagtttcgcgaggatgagtgggatgacaac
atcagttattttattgaaaagaagcttcgtgtttggtgccatctgaaaaatagacaatgg
gaaccaggacaggtgcaatcaacttctggagacaaagcctcagtattgctctctgatggc
agtgttgtggcagtgcccgttgaagagcttttacctgcaaatccagatattcttcagggc
gtggatgatctcatacaactttgttatcttaatgagccatcggttcttcacaacctccaa
tatagatatgctcaagatagaatatatactaaggtcgggcctgttctaatagcagtcaat
cccttcaaagagatccaattgtatgggagcaaacttgtaacagcatacaagaagaaactc
ttggatagtcctcacatttattctattgctgaaactgcctacagtcaaatgatggaagat
gaagtaaatcaatccatcatcataagtggggaaagtggatctgggaagacggaaacagca
aaattcgcgattgaatatttggttatgattagtggaggcaacaatcatgtagaaagtgag
ctgctgcagacaagttgcatattggaggcttttggaaatgctaaaaccctcaggaataac
aactccagtcgatttggaaggttgattgaaatttattttagtgcagagggaggaatttgc
ggtactaatgtacaagcatttcttcttgaaaagtcaagagtggttcaactggctcatgga
gagaggtcttaccatatcttttaccagctatgtgctggggctccttctgctttgagagat
aaactgaagctgacaggtgcttcggagtacaactttctcaaccagagtaattcgttggtg
atccataatgttgatgatgcaaaaaagtttcatgtgcttgtgaaagccctaaacactgcg
gggatttctgaaagagaccaagagcatgcttttcagatggttgctgcagtgctatggctg
ggaaacataacattcgcagcaattggcaatggaaacaatgttgaagttgtgcaatgtgaa
gccgttataaatgctgctagcttaatgggctgtagtgccaatgacctcatgctagcttta
tcaaccagggaaatacaagctggcaaggataaggttgtcaagagtttaaccatgcaacag
gcaattgatacaagagatgcaatggccaagttcatctatgcaaacctgtttggctggata
gtggataaaattaatagatctcttgcaatgggtaaagagaagactggtagaagcataaac
attttagatatttatggtttcgaatcatttgagaaaaatagctttgaacaattttgcatt
aactatgcaaatgagaggctccagcagcattgttaccgacatctcttcaaacttgagcaa
gaagaatatgaattggatggaattgattggacaaaagtagattttcaagataaccaagag
tgcttggatctttttgagaagaaacccattgggataatatctttattggatgaagaatca
aattttgataaagcaactgacttggccttcgccaataagcttaagcagcacctgaaagct
aacccttgctatagaggagatagagaagaatttggtgttcgccattatgctggagaggtt
atctatgacacaagtgatttcttgaataagaatagagatacagtgcatcccgacactatt
cagctactctcatcaagcagtgaggacttgctcaagttgtttgcctcctcttttgctaat
cagtccaagaaaacagcaagttcaattcatattgagatatcagactttcagaagcaaaca
gttgctactaaatttaaggatgtgttgttcaaattgatgcagcagttggaaagtactgcg
ccacacttcatttgttgcataaaaccgaacaataagcaggttcctggcatgtacaacaat
gatcttgtctttgagcagctcagaagctacagtcttcttgaggttgttcggatctctaga
tctgggtatcctactaggatgacacatcaagaattctgtataaggtatggtgtcctcctt
ccagaagaccatgaacgcaaagatcccttaagcatgtctgtttccattctgcggcaattt
gacatccttcccgaaatgtaccaagttgggtatacaaagttatatttccgggcaggacag
attgctgtgctggaggatgtgaggaaacaagttctgcaaggcactcttgaggtgcagaag
tgctacagtggtcctcatgctcgtcgtcatttccatgagctcaaaggagtagtgatcata
cttcaatcatttgttcgtggtgaaattgctcgaaggcagtataagtattctctggagtct
aaacagaaagatgctaataaagaaaatgatgagcagctggtggctgttctgcagatacaa
tcagctattcgttgctggttggctcagaggcatcttaatcaactgcagaagtcgaaaaag
ttaattcaagacagaccaaaaccagccaaaaagactacggaggtgaagcaggacttgcct
gcagaaattttaccttctgttgtcgaagacctcgaaaggcgggttttggtggctgaggca
acccttgaagagaaggaaaaggaaaatgctgccctaaaggagcaagtaaatcaattggag
tcccgatggtcagattatgaggtcaggatgaggtcgatggaggagatgtggcaaaaacaa
atggcatcattgcaggcaagtttggtttcagccaagaagagccttggtgttgacaattct
gccggtcagcctggaaaacctgaaggttctccatctccttgcggttatgaatctgaagac
actacaacaactatgggcactcgcactcctgggggcagcactcctatagaatatgctagc
aacggtgtagattttggaggtattagagagattaatggtggtttatgtgtagtcaattac
cttagcagggagtttgagctacggaaacaaaattttgatgacgaagccatggcaattagt
cagttgaagtcagggcagttacagtctactagtcctgcagaagattttcgaagactcaga
cacaagtttgacgaatggaagaaagactacaaggctcggttaaaggagacaaagtcaaag
gtacacaagcttggttattcagaagcagagaaaactcgtagaaattggtggggaaagaag
agcaaaagataa
DBGET
integrated database retrieval system
