Solanum stenotomum: 125864785
Help
Entry
125864785 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125864785
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125864785
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125864785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
125864785
NCBI-ProteinID:
XP_049400808
LinkDB
All DBs
Position
5:61622010..61628678
Genome browser
AA seq
397 aa
AA seq
DB search
MDEVKKSEGHMTSPAAFVEGGIQDACDDACSICLEAFCESDPPSVTSCKHEFHLQCVLEW
CQRSSNCPMCWQSISLKDQMSQELFEAVEQERNFRVNAERNATLFHFPALGDFELQHLPV
DIDDPELEERILQHLAVAASMGRAHHVGRREGSRNHSSTNHRPQLLVFPTHHNSSPTTSV
SPYPTGSISDPAATTTVDSPLPISSGSSDSPRQMPHLSSVQSDSPRQMPHLSSVQSDQLS
ALSSGSVLTPATTQGISSGDRSSSSSSFTPIHRRAGPSELQSFSESWRSRFSSMSMKYKE
SISKNTRGWKERLFSRSSSMPDAGPVGRESNAGIASLSHLMERLETRENSRAGSVSAVTN
IVDSSHTLQRDHGNMRTHIGNGLNRNSTASAASSAQN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtcaagaaatcagagggtcatatgacatcacctgcagcttttgtggaagga
ggaattcaggatgcatgtgatgatgcttgcagcatttgtctcgaggctttctgcgaaagc
gatcctccctcggtaactagctgcaagcatgagtttcatctccagtgcgtcctggaatgg
tgtcagagaagttctaattgtcctatgtgttggcagtccataagtctgaaagatcagatg
agtcaagaattgtttgaggctgtggaacaagagaggaattttagagttaatgcagaaaga
aatgctacactatttcactttcctgcgctgggagattttgaactacagcatttacctgtg
gatattgatgatcctgaacttgaagagcgcattcttcagcatttggctgttgctgcttca
atgggaagagctcaccatgtgggtcgaagggagggctcaagaaatcactcatccaccaat
caccgtccacaacttttagtatttccaactcatcataattcatctcctaccacttctgtt
tcaccttatcctactggatcaatttctgatcctgctgcaaccacaacagttgattcccct
cttcccattagctccggtagcagtgattcaccacgacagatgcctcacctttcatcagtt
caaagtgattcaccacgacagatgcctcacctttcatcagttcaaagtgatcaactttct
gctttatcatctggttctgttctaacgcctgccacaacacaaggaatatctagtggtgat
agaagctcttctagttcatcctttacaccaatccataggagagctggaccatcagagttg
cagtcattttcagagtcctggagatctcgatttagttctatgtctatgaaatataaagaa
tcaatctcaaagaatacacgagggtggaaggagagattgttttctcgaagttcttcaatg
ccggatgctggtcctgttgggagagagtcaaatgctggaattgctagtctatctcacctg
atggaacgtctggaaactcgagaaaatagtagagctggctctgtttcagcagttactaat
atagtggattcttcacacacactccaaagagaccatggtaatatgcgtactcatattgga
aatggattgaacagaaactcaacagcttctgctgcaagttcagctcagaattaa
DBGET
integrated database retrieval system
