Solanum stenotomum: 125864806
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Entry
125864806 CDS
T08385
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125864806
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125864806
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
125864806
NCBI-ProteinID:
XP_049400846
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Position
5:complement(62991682..62994454)
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AA seq
492 aa
AA seq
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MMSGDVFSFPSSVKAVLPHHHQELQTTNPNPKPNTSSKKRRNLPGTPDPDAEVIALSPKS
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKLEQVKKKVYICPEKTCIHHD
PSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFS
RKDSFITHRAFCDALAEESSRITSVGATNLINFPNNVTLLNQQQSNLHGGFAGFRSDFGS
YTTGNNNNSLHQQQQQQKPRLSLWLDQQAANHNNPLQISSSSNLFDNSSTGGFQEMIQMQ
SQNVFGSSNSTSASFSMAEAYNSLYSDSQNSQLTKPNSTTPMSATALLQKAAQMGSTKSS
NQSTFFSNNFSKLNSSSSSSPNTPTFTSLQSCETTDQIFAKKSEDYTTSLLHSNNGLIGC
PNFTSSGINLDEAIMQTVGMHSTQAVSINGMDNCLTRDFLGIKHEGNCQFLPQEIIKFAS
MNSSAMGLSHLQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatgtgttttcatttccttcttctgttaaagcagtacttcctcatcat
catcaagaacttcaaacaacaaaccctaaccctaaacctaatacttcttcaaagaaaaga
agaaatcttccaggaacaccagatccagatgctgaagttattgcactttcaccaaagtca
ctcatggcaacaaacagattcatatgtgagatttgcaacaaaggttttcaaagggaccag
aatttgcaacttcatagaagaggtcacaatcttccatggaagctaaagcaaagaaacaag
ctagaacaagtgaagaagaaagtgtatatttgtccagaaaagacatgtattcaccacgat
ccatcgcgtgcacttggagacctaactggaattaagaaacattttagtagaaaacatgga
gaaaagaagtggaaatgtgaaaaatgttcaaagaaatatgcagttcaatcagattggaaa
gctcatagtaaaacttgtggaactagagagtacaaatgtgactgtggcacacttttttca
agaaaggatagttttatcacacacagagctttctgtgatgctttagctgaggagagttca
agaatcacatcagttggggctaccaatttgatcaacttcccaaataatgtcacattgttg
aaccaacaacaatcaaatttacatggcggattcgcaggatttagatcagattttggtagt
tacacaactggtaataataataattctcttcatcagcagcagcaacagcaaaaaccaaga
ttatcactttggttagatcaacaagcagctaatcataataatcctcttcaaatatcttca
agttcaaatctttttgacaattcaagcacagggggttttcaagaaatgatccaaatgcaa
tcccaaaatgtatttggatcatctaattcaacatctgcaagcttttcaatggctgaagca
tacaattctctgtattccgatagtcaaaacagccaattaaccaaaccaaattcgaccacg
ccaatgtctgctactgcacttctacagaaagcagcacaaatgggttctacaaaaagtagc
aatcaatcaactttctttagcaacaatttcagcaaactgaactcttcttcttcatcctcc
ccaaatacaccaacttttaccagtttacagagttgtgaaacaacagatcaaattttcgcc
aagaaatctgaagattacacaacgtcgttgttacacagcaacaacgggctaattgggtgt
ccgaattttacttcttcagggattaatttggatgaggcaattatgcaaacagttggtatg
catagtactcaagcagtttcaattaacggtatggataattgtttgacgagagattttttg
ggaattaaacacgaagggaattgtcagtttttgccacaagagattattaagtttgcatcg
atgaatagttcagctatggggttaagccatttacagtaa
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