Solanum stenotomum: 125864807
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Entry
125864807 CDS
T08385
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125864807
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125864807
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125864807
03036 Chromosome and associated proteins [BR:
sstn03036
]
125864807
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125864807
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125864807
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125864807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
125864807
NCBI-ProteinID:
XP_049400847
LinkDB
All DBs
Position
5:complement(62689064..62695698)
Genome browser
AA seq
492 aa
AA seq
DB search
MLKNIIKRGHKKVPKSEVSDFGHAPPAGGRNSGNVSTSDVVVNHASRGNMVTNSIQSQQT
PSVMTSAAPAPGNIENLPLFRDVPISERQVLFFRKLQICCFQFDFTDTMKLVREKEIKRQ
TLVELVDYVQSGAGKISESNQEEMVKMISVNIFRCLPPASHENTGSENVEQEEDEPCLEP
SWPHLQLVYELLLRYVVSSDTDTKLAKRFIDHSFVLKLLDLFDSEDPREREYLKTILHRV
YGKFMVHRPFIRKGINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVR
ALIPLHKPKSVAMYHQQLSYCIVQFVEKDYKLSDTVIRGLLKYWPVTNCQKEVLFLQELE
EVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRNVIFPI
IFYALQKNIDNHWNQAIHGLTVNVRKMFMEMDADLFDECQRQYSEKAAQATELEEQRELR
WQRLAAAATQER
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaatatcataaagcgagggcataaaaaggtgcctaaatcagaagtatctgat
tttggtcacgcgccgccggcgggaggtaggaattccggcaatgtttcgacgtctgatgtg
gtggtgaatcatgcttcgagaggaaacatggtaacgaattcgattcaatcacaacagaca
ccttcagtgatgacatctgcagctccagcaccgggaaacattgagaaccttcccttgttt
cgtgatgtgccgatatccgaacgtcaagtgttgttttttaggaaactacagatttgttgt
tttcagtttgattttactgatacgatgaaattggtaagggagaaagagataaagaggcaa
acacttgtggagcttgtagattatgttcaatctggtgctggaaaaatcagtgaaagtaat
caagaagaaatggtaaagatgatatcagtgaatatatttcgttgtttacctccggcgtct
catgagaatacaggatccgaaaatgtggaacaggaagaggatgagccatgtctcgagcca
tcttggcctcatttacagcttgtgtatgaattgctgttgaggtatgtggtttcatcagat
actgatacaaagttagctaaacgctttattgatcactcatttgtattgaagttattggat
ttgtttgattccgaggacccaagggaaagagagtatttgaaaacaatacttcaccgcgta
tatgggaagtttatggtgcatagaccatttataaggaagggaatcaataacatcttttat
aggtttatttatgagacagagaggcacagtgggataggtgaattactagagattctaggg
agtattataaatggttttgcgttacccatgaaagaggaacacaagctattccttgttcgg
gcactcataccactgcacaagccgaaatcggttgcaatgtatcatcagcagttatcctac
tgtattgttcagtttgttgaaaaggattacaagttgtctgatacggttataaggggtttg
ttgaaatactggcctgtcactaattgccaaaaagaagtcctctttcttcaggagcttgaa
gaagtgttggagaccacacaggcggcagaatttcagcgttgcatggttcctctttttaga
cagattgctcgttgccttaacagcccacacttccaggttgcagaacgagccctatttcta
tggaacaatgagcacatagtgggattgatcgcgcagaaccgcaatgtcattttcccgatc
attttttatgctctgcaaaagaacatagataatcattggaatcaagctatccatgggctg
actgtaaatgttcgcaaaatgttcatggaaatggatgctgatctgttcgatgagtgccaa
agacagtattctgagaaagcagcccaggccactgaactggaagagcagcgagaactaaga
tggcagagattagcagcagctgcaacacaagaacgctaa
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