KEGG   Solanum stenotomum: 125864902
Entry
125864902         CDS       T08385                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
sstn  Solanum stenotomum
Pathway
sstn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125864902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125864902
   03036 Chromosome and associated proteins [BR:sstn03036]
    125864902
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125864902
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    125864902
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 125864902
NCBI-ProteinID: XP_049400964
LinkDB
Position
5:19289346..19299696
AA seq 350 aa
MSLFGTGATAAVNTNPNKSVEVQQPPSDSVSSLCFSPKANLLVASSWDNQVRCWEVMGSG
TNVGVVPKASISHEQPVLCSTWKDDGTTVFSGGCDKQVKMWPLSGSQPVTVAMHDAPVKE
LAWIPEMSLLVTGSWDKTLRYWDLRQSNPAHVQQLPERCYALTVKHPLMVAATADRNIIV
FNLQNPQTEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLEDSQQSKNFTFKC
HREGNEIYSVNSLNFHPTHGTFATAGSDGSFNFWDKDSKQRLKAMSRCSQPIPCSAFNND
GSIYAYAVCYDWSKGAENHNPSTAKTNIYLHFPQDSEVKGKPRIGTSSRK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgtcgctattcggtaccggtgccactgctgctgtaaacacaaatcccaataagtctgtc
gaggttcaacaacctccttctgattctgtgtcaagtctctgcttcagtcccaaggctaat
cttctggttgctagttcatgggataaccaggtgcgatgttgggaagtgatgggaagtgga
accaatgttggagttgtacccaaggcctctatatcacatgaacagccggttttatgctca
acttggaaggatgatgggacaactgtcttctctggaggttgtgacaagcaagtgaaaatg
tggccactatctggtagtcaaccggtaacagtagccatgcatgacgctcctgtcaaggaa
ttggcttggatcccagagatgagtctcttggtcacaggaagctgggataagactctgagg
tactgggatttgagacagtcaaatccagcacatgtccaacaacttcctgagcgctgctat
gcacttacagtgaaacatcctttgatggttgctgccacagctgatagaaatattatagtt
ttcaatttgcagaatcctcagactgaattcaagagaattgtctcacccttaaagtatcaa
actcggtgtttagctgccttccctgatcaacaaggtttcttggttggttctattgaagga
cgggttggtgttcatcatcttgaggattctcaacaaagtaaaaacttcacattcaaatgc
cacagggagggcaacgaaatttactcagtcaactctctgaacttccaccctacacatgga
acatttgcaaccgcgggatctgatggttccttcaacttttgggataaagatagcaaacag
aggctcaaggcaatgtcaagatgcagccagcccataccttgcagcgcgttcaacaatgat
ggctcaatctacgcatatgcagtttgttatgattggagcaagggtgcagaaaatcataat
ccatcaactgcaaaaacaaacatttacttgcacttcccacaggattctgaggttaaaggc
aagccacgaattggaactagcagtagaaagtga

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