Solanum stenotomum: 125864929
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Entry
125864929 CDS
T08385
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00906
Carotenoid biosynthesis
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125864929
Enzymes [BR:
sstn01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
125864929
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
HI0933_like
GIDA
Pyr_redox_2
FAD_oxidored
Thi4
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
125864929
NCBI-ProteinID:
XP_049401013
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Position
5:complement(61576084..61582212)
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AA seq
615 aa
AA seq
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MGTLSFMFPNSLLDGTCKIVALGDSKTRYNKQGSSCFDPLRIGNCTDQQQLCGLSWGWDK
AKGRRGGTVSNLKAVVDVDKKVESYGSSDVEGNESGIYDAIVIGSGIGGLVAATQLAVKG
AKVLVLEKYVIPGGSSGFYERDGYKFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIP
DPTTVHFHLPNDLSVRIHREYDDFIEELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKS
LEEPIYLFGQFFKKPLECLTLAYYLPQNAGSIARKYIKDSGLLSFIDAECFIVSTVNALQ
TPMINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLDDHGSQILYRANVTSIILDNGKAV
GVKLSDGRKFYAKTVVSNATRWDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVKA
DVLPPDTDCHHFVLEDDWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWE
GLSRKDYEAKKELVAERIISRLEKTLFPGLKSSILFKEVGTPKTHRRYLARDSGTYGPMP
RGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSDVL
DSALLRLLGWLRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttgagttttatgtttcctaattcacttcttgatggtacctgcaagattgta
gctttgggtgacagcaaaaccagatacaataaacagggaagttcttgttttgaccctttg
agaattggaaattgtactgatcagcagcagctttgtggcttgagttgggggtgggacaag
gctaagggaagaagagggggtactgtttccaatttgaaagcagttgtagatgtagacaaa
aaagtggagagttatggaagtagtgatgtagaaggaaatgagagtggcatctatgatgcc
attgttatagggtcaggaataggtggattggtggcagcgacgcagctggcggttaaggga
gctaaggttttagttctggagaagtatgttattcctggtggaagctccggcttttacgag
agggatggttataagtttgatgttggttcatcagtgatgtttggattcagtgataaggga
aacctcaatttaattactcaagcattggcagcagtaggacgtaaactagaagttatacct
gacccaacaactgtacatttccacctgccaaatgacctttctgttcgtatacaccgagaa
tatgatgacttcattgaagagcttgtgagtaaatttccacatgaaaaggaagggattatc
aaattctacagtgaatgctggaagatctttaattctctgaattcattggaactgaagtct
ttggaggaacccatctacctttttggccagttttttaagaagccccttgaatgcttgact
cttgcctactatttgccccagaatgctggtagcatcgctcggaagtatataaaagattcc
gggttgctgtcctttatagatgcagagtgctttattgtgagtacagttaatgcattacaa
acaccaatgatcaatgcaagcatggttctatgtgacagacattttggtggaatcaactac
ccagttggtggagttggcgagatcgccaaatccttagcaaaaggattggatgatcacgga
agtcagatactttatagggcaaatgtcacaagtatcattttggacaatggcaaagctgtg
ggagtaaagctttctgacggaaggaagttttatgctaaaactgtagtatcgaatgccacc
agatgggatacttttggaaagcttttaaaagctgagaatctaccaaaagaagaagaaaat
ttccagaaagcttatgtaaaagcaccttcgtttctttctattcacatgggggttaaagca
gatgtactcccaccagacactgattgccaccattttgtcctcgaggatgattggacaaat
ttggagaaaccatatggaagtatattcttgagcattccaacagttcttgattcctcattg
gccccagaaggacaccatattcttcacatttttacaacgtcgagcattgaagattgggag
ggactctctcggaaagactatgaagcgaagaaagagcttgttgctgaaaggattataagc
agacttgaaaaaacactcttcccagggcttaagtcatctattctctttaaggaggtggga
acaccaaagacccacagacgataccttgctcgtgatagtggtacctatggaccaatgcca
cgcggaacacctaagggactactggggatgcctttcaataccactgctatagatggtcta
tattgtgttggcgatagttgcttcccaggacaaggtgttatagctgtagcattttcagga
gtaatgtgcgctcatcgtgttgcagctgacttagggtttgaaaaaaaatcagatgtgcta
gacagtgctcttcttaggctacttggttggttaaggacactagcatga
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