Solanum stenotomum: 125865170
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Entry
125865170 CDS
T08385
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125865170
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125865170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
125865170
NCBI-ProteinID:
XP_049401314
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All DBs
Position
5:complement(60711849..60720173)
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHARNVGQEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIAAAVNAMQF
YSNVQPSIRGRSVYVQFSSHQELTTVDQNAQGRGDEPNRILLVSIHHVLYPITVEVLHQV
FSPHGIVEKIVTFQKSAGFQALIQYELTQTAISARNSLQGRNIYDGCCQLDIQFSNLDEL
QVSYNNERSRDFTNPNLPSEPKGKSPQQGYGDAGAMYPWQGSGPRGVGFPQMGNAAAIAT
AFPSGLPPGISGTNDRCTIIVSNVNPDRIDEDKLFNLFSIYGNIVRIKHLRNKPDHALVQ
MGDGFQAELAVHFLKGAMLFGQRLEVNYSKYPNINTGPETRDYSNSNLNRFNRNAAKNYR
YCCSPTKMIHVSSLPQDVTEEEIVAHLEEHGPIVNTKLFEMNGKKQALVLFDNEEQATEA
LVCQHATSLGGSIIRISFSQVQSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgtcaaaagtcattcatgctcgcaatgtgggccaagagatctcagagaat
gacttgcttcagctatttcagccctttggagtcattaccaaacttgtaatgcttagggca
aaaaatcaggccctcttgcaaatgcaagacattgctgcagctgtaaatgccatgcaattc
tattcaaatgttcagcccagcataagggggagaagtgtatatgtacagttttcatctcat
caagaactgacaaccgtggatcagaatgcacaagggcgaggagatgagcccaatcgaatt
ctcttagtttcgatacatcacgtgctatatcctataactgtggaagtgctgcatcaagtg
ttttcacctcatggaatcgttgagaagatcgtgacatttcagaagtcggccggttttcaa
gctttaattcagtacgaattaactcagactgctatttctgctaggaactctctccagggg
cgtaatatatatgacggctgctgtcagcttgacatacaattctcaaacctggatgaattg
caagtgagctacaacaatgagcgctcgagagacttcaccaacccaaatctaccatcagag
ccgaagggcaaatctcctcaacaaggatatggagatgctggagccatgtacccctggcaa
ggttctgggcctcgtggagttggatttcctcagatgggaaatgctgcagccattgcgact
gcctttcctagcggtttgccccctggtataagcgggacaaatgacaggtgtactattatt
gtatctaatgtaaatccagatagaatagacgaggacaagctttttaatctgttctccatt
tatgggaacattgtcagaattaaacatttacggaataaaccagatcatgctcttgttcag
atgggcgatggcttccaggcagagctggctgtgcactttttgaagggtgccatgttattt
ggccagcggttggaagtcaactattccaagtacccaaatattaacaccggaccagagacc
cgcgactattcgaactcaaatctcaatcgttttaaccggaatgctgccaaaaactaccgg
tactgttgctcccccaccaagatgatccatgtttcaagcctgccccaggacgtgacggaa
gaagagatagtggctcatttggaggagcatggtcccattgtgaacacaaagcttttcgaa
atgaatgggaagaagcaggctcttgttcttttcgataacgaggagcaggcaactgaggca
cttgtttgtcaacatgctacatcccttggtggatcgatcattcggatttcgttttctcag
gtgcaaagcatctga
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