Solanum stenotomum: 125865729
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Entry
125865729 CDS
T08385
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sstn
Solanum stenotomum
Pathway
sstn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125865729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125865729
03036 Chromosome and associated proteins [BR:
sstn03036
]
125865729
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125865729
Coactivators
SAGA/TFTC/STAGA complex
125865729
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125865729
STAGA complex
125865729
TFTC complex
125865729
SAGA complex
125865729
SLIK complex
125865729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
LRR_9
TTI1
Motif
Other DBs
NCBI-GeneID:
125865729
NCBI-ProteinID:
XP_049401915
LinkDB
All DBs
Position
5:complement(2022053..2027890)
Genome browser
AA seq
546 aa
AA seq
DB search
MSIVPKETIEVISQSIGVSNLSPDVLPALAVDVEYRIREIMQEAIKCMHHSKRTTLSTDD
VDAALSLRGVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDVEFKDVIEAPLPKAPLDAAV
VAHWLAIEGVQPAIPENPLPEALAMLSDTRNTEYKEDGVPVDIKVPVKHVLSRELQLYYE
KIKELTVDRSNPLLFKEALRSLATDSGIHPVVPYFTYFISDEVSRNLNNFPLLFALMRLL
WSLLQNTQIHIEPYLHQLMPSIMTCLVARRLGNRLSDNHWELRDFSATLVALICKRYGRV
YHNLQSRVTSTLLHAFLDPTKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLQLLEPEM
QPEKQKNEMKRFEAWRVYGALMCAAGLCIYERFKLLPASLSPSTRTFLKSKWKVSTTLSS
KRKASLDNMMTQPPPKRLMTDGPISSMTANSLPVSTQGPAVGYAVTPRVTETGVSSASHG
LQHNENMLRTIGRRDMTAGQGQKTSVPLDQAWKEDLDAVRLLPSLFECFGERMFSFTPSP
ELSFFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagtaccgaaagagacaatagaagtgatatcacaaagtataggtgtaagcaat
ttgtcaccagatgtcttgcctgctctcgccgtcgatgtcgaataccgcattcgagagatt
atgcaggaagctattaaatgtatgcatcattcgaagagaactacgttatctactgatgat
gtagatgctgcccttagcttgagaggtgtagagccaatttatggctttgcttcaggggat
ccgttaaggttcaggagagcggctggacataaagatttgttctacattgaagagaaggat
gtagaattcaaagatgtgatcgaagctcctttgccgaaagcaccgctagatgctgctgtt
gttgcccattggttagctatagaaggagtacaacctgctattcctgaaaaccctctgcct
gaagccttagccatgctgtctgatactagaaataccgagtataaggaggatggagttcct
gttgatattaaagtacctgttaagcatgtcctatcgcgtgagcttcagctctattatgaa
aaaattaaagagcttactgtagatagatctaatccccttctctttaaagaagctctacga
agcttagcaacagactcagggattcatccagtagttccttactttacatattttatttct
gatgaggtttctcggaatttgaacaattttcctctccttttcgctttgatgcggctactc
tggagccttctccagaatacacaaatacatattgaaccatatctgcaccagttgatgcct
tctataatgacatgccttgttgcaagaaggttgggaaacagattatctgacaatcattgg
gaacttagggacttctcagcaacgttggttgctttaatatgcaagagatatggtcgtgtg
taccacaatctccagtcacgtgtcaccagtactttgctgcatgcttttctggatccaact
aaggcgctgccacaacattatggagcaattcaaggactcgcagctcttggacctggtgtg
gttcgcctacttgtgctgccaaatcttgaggcttatttgcaattactggaacccgaaatg
cagcccgagaagcaaaaaaatgaaatgaagaggtttgaagcttggcgtgtatatggagcc
ttgatgtgtgctgctggtttatgcatctacgagcgcttcaagttgcttccagcttcacta
tctccatccactcgcacattcctgaagagtaaatggaaagtctcaactacattgtcgagc
aaacgcaaagcaagcttggacaacatgatgacccagcctccacccaagagattaatgaca
gatggcccaataagttcaatgacggcaaattctctgccagtaagcacacaaggaccagct
gttggatatgctgtaacccctagggttacagaaactggtgtatcttcagcatcacatggt
ttgcagcacaacgagaatatgctgagaaccattggtagaagggatatgactgctggtcaa
ggtcaaaaaacatcggttccacttgatcaggcctggaaggaagatctggatgctgtgcgg
ttgttgccatctctgtttgaatgttttggtgaaaggatgttttcctttaccccttcacct
gagttgtctttctttttgtga
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integrated database retrieval system
