Solanum stenotomum: 125865734
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Entry
125865734 CDS
T08385
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
sstn
Solanum stenotomum
Pathway
sstn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125865734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125865734
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125865734
Prokaryotic type
Archaeal type
TFB
125865734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
A2L_zn_ribbon
DUF7573
PP1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
125865734
NCBI-ProteinID:
XP_049401921
LinkDB
All DBs
Position
5:complement(60080303..60084439)
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AA seq
312 aa
AA seq
DB search
MGDSYCSDCKRNTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG
GPVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLV
STIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVKEICSIANGATKKE
IGRAKEFIVKQLKVEMGDSMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDI
RRSPISIAAAIIYMLTQLTDSKKPLRDISIATTVAEGTIKNAYKDLYPHASKIIPQWYLK
DKDIKSLSSPKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcatactgttcggactgcaaacggaacacggaggtggtatttgaccatgcc
gctggtgatacagtttgctcggagtgtggacttgtgctggaatcgaggtcaattgatgag
acttctgagtggcgtacgtttgctgatgaatccggtgatcatgacccgaaccgtgttgga
ggacccgtcaacccgttgcttggtgatgtcggtctttctactgtcatttctaaaggtcct
aatggaagtaatggagattcatctctagctaggttgcagaatcgaggtggtgatcctgaa
cgtgccctagttatggcttttaaagctattgctaatatggctgataggttgagccttgtt
tccaccataaaggaccgagcaagtgagatatacaaaaggctggaagaccagaagtgtacg
agaggaaggaatctggatgccttggtggctgcttgtatttacattgcgtgtcggcaagaa
ggcaaagcacgcactgtaaaagaaatatgctcaatcgccaatggagctacaaagaaggaa
attggccgagcaaaagagttcattgtgaaacaattgaaggttgaaatgggagactcaatg
gagatggggactatacatgctggagactatctgagacgtttctgttctaacattggaatg
aaccatgaagagattaaggctgtccaggaaactgtcaagaagtcagaagagtttgatata
aggaggagtcctatttcgattgctgcagcaataatatacatgctaacacagcttacagat
tcaaagaaacccctgcgagatatctcaattgcaaccacagttgcagaagggactataaag
aatgcatataaggatctctatccacatgcttccaaaattatacctcaatggtatctcaag
gataaggacattaagagcctaagcagtcccaaggcgtag
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