Solanum stenotomum: 125865841
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Entry
125865841 CDS
T08385
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125865841
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125865841
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125865841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-RING_2
zf-CCCH_3
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-ANAPC11
zf-CCCH_9
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125865841
NCBI-ProteinID:
XP_049402056
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All DBs
Position
5:13380771..13409609
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AA seq
360 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGDHCEFSHDWNNPSNNVCTYYQKGACAYGSRCRYDHVKLSRSQ
PSAQSSAQPQQYLLSSSAPTNVPPGMGAHNADVVPGISTEYLASSRPYDASSQPAWNQKS
ELQDALEIDDMIELNSDNPADRSICAFAAAGNCPRGEKCPRVHGDMCPTCGKHCLHPFRA
EEREEHIKTCENKQKHLDLLKRSQEIECSVCLERVLSKSTAAERKFGILSECDHPFCVSC
IRNWRGSSSSGMDVNSALRACPICRKLSYFVIPSVIWYFTKEEKEEIVDNYKNKLRSIDC
KHFDFGNGTCPFGTSCFYKHQHRDGRLEEVVLRHLGSEDGSTVIAKNIRLSDFLRNLEIR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagggttctttgcaagttctttgcacatggggcatgtctgaagggggatcat
tgtgagttttcacatgattggaacaatccttctaataatgtatgcacctactaccaaaaa
ggagcttgtgcttatggaagcaggtgtagatatgatcatgttaaactgtctcgatcacag
ccttcagctcaatcttcagcacaacctcaacaatatctgctttcaagttctgcacctacc
aatgtgcctcctggaatgggtgcacataatgcagatgttgtgccaggtatttctactgag
tatttagcttcaagcagaccttatgatgcttccagccaaccagcatggaaccaaaagtcg
gagcttcaagatgcattggagattgatgacatgattgagttaaacagtgataatccagct
gatcggtcaatctgtgcttttgctgctgctggtaattgtcctcggggagaaaagtgtcct
cgtgttcatggagatatgtgtccaacctgcggaaagcattgcttgcatcctttcagggct
gaggaaagagaggagcatataaaaacatgtgagaacaagcaaaagcaccttgatttattg
aagcgcagtcaagaaatagaatgcagtgtatgccttgaacgtgttctttccaagtcaaca
gcagctgagaggaagtttgggatcctttctgagtgtgatcatccgttttgcgtatcgtgt
ataaggaattggcgtggcagttcttcctctgggatggatgttaattctgcactgagggct
tgccccatatgccgaaagctttcatattttgtcattccaagtgttatttggtacttcaca
aaagaagaaaaggaagaaatagttgacaactacaaaaacaaactcagatctatcgactgc
aagcactttgactttgggaatgggacttgtccatttgggactagctgtttctacaagcat
caacaccgtgatggtcgtctggaggaagtggtactacgccatcttggttctgaagatggt
agcacagtaatcgctaaaaatatcaggctctcggacttccttaggaatttggaaattagg
tga
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