Solanum stenotomum: 125866087
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Entry
125866087 CDS
T08385
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125866087
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
125866087
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
125866087
Prokaryotic type
125866087
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
125866087
NCBI-ProteinID:
XP_049402337
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Position
5:59823125..59827074
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AA seq
777 aa
AA seq
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MERNKDQNTQAYVQILGTGMDTQETSPSVLLCFDHERFIFNAGEGLQRFCMEYKIKLSQI
DHICLTRVCSETTGGLPGLLLTLAGMKNGSSESDDHVRIWGPPNLDLLVNAMKTYVPHAV
MTKKNIIPQSGSALASPLHAEELRDVEKFKAVSISVFLLSPTQFSSNDTSIVYICKLHDI
RGKVDIVKAKAYGLEDKRKLGQLQKGISVKSDLLDIEVHPDDVIGPPIPGPIVLIVDCPT
EPHAQELFSAQALDVYYSNSESNSTNVVNCIIHLSPATVVNSPVYEKWMRKFDSAQHIMA
RATRKHETTPILASSARIGTRLHYLCPQLFPDPSFPSVHNDDDDVAAPNIKVPVEGSVCG
ISAENLLKFALRPPRKLGLDRSCVQNTMTSSVFIEELLSEIPEIADAAKSISKFWHKPKE
DEVELSDRQDSNDVVTEEPSKFCVPKCLENVQRDDLEIVFLGTGSSIPSKYRNVSSIYVN
LFSKGGLLLDCGEGTLAQLKRRYGISGADSVVRNLKCIWISHIHADHHAGLARILALRRD
LLKEVENEPILVIGPEKVGEFLKEYIKLEDLDMLFLDCWSTTRSKWDNMEAEDSSLQPCS
KKLKPSTPLDDIALLKHLRKVLGEAGLVRLISFPVVHCDDAFGVILESADRMNRGEVVPG
WKVVYSGDTRPCSEVINASLGATILIHEATFEDGLVEEAIARNHSTIKEALEVGDSAGAY
RVILTHFSQRYPKVPALDEVSMQRTCIAFDLMSVNLADLPVLPKVLPYLKLLFRNNG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaacaaagaccagaatacgcaagcctatgttcagattttggggacaggaatg
gatacacaagaaacatccccatctgttctgctctgcttcgaccacgaaagattcatattt
aatgctggagagggattacaacgcttttgcatggagtataagattaaattatctcagata
gaccatatatgtcttactcgtgtctgctctgagacaacaggtggacttccaggcttgtta
ttgactttggctggcatgaaaaacggaagttctgagagtgatgatcatgttcgtatatgg
ggtcctccaaatctagatttgttggttaatgcaatgaagacttatgtacctcatgctgtc
atgacgaagaaaaatatcattccacaaagtggatctgcattagcttcccctttacatgca
gaggagctgcgagatgttgaaaagttcaaggcagttagtatatcagtgtttctcctatca
ccgactcaatttagttcgaatgatacctccattgtatatatttgtaaattacatgacatc
agggggaaagttgacatcgtaaaggctaaagcttatggactcgaagataagagaaagctt
ggacagttgcagaaagggatcagtgtgaagtcagatcttctggatatagaggtccatcca
gatgatgttataggtccacctattcctggtccgattgtactgattgtcgactgtccaaca
gaacctcatgcacaagagttattctctgcacaagctcttgatgtgtactattcaaattcc
gaaagcaactccaccaacgttgtgaactgcatcattcatttgagccctgctaccgtcgtc
aatagtccagtttatgagaaatggatgaggaaatttgattctgcacaacatattatggca
agagctacaaggaagcatgaaacaactccaattctagcatctagtgctagaataggtaca
agactgcattatttgtgtcctcagctttttccagatcctagttttccttctgttcataat
gatgatgacgacgttgcagctccaaatatcaaagtaccggtggagggttcagtttgtggc
atatctgctgaaaatctcttaaagttcgccttacgtcctcctagaaaactgggattggac
agatcatgtgttcaaaatacgatgacctcctccgttttcattgaagagttactttcagag
attcctgagattgctgatgcagctaagagcataagcaaattttggcacaaacctaaagaa
gatgaggtagaattatccgacaggcaggacagtaatgatgtcgtgactgaagaaccttcg
aaattctgtgtccctaagtgtctcgagaatgtacagagagatgatctagagattgttttt
cttggcactggttcttccataccttcaaaatatcgaaatgtcagctctatctatgttaat
cttttctctaaaggaggtttactccttgactgtggagaaggaactttggcacaactcaag
aggagatatggcattagtggtgcagacagtgtagttagaaatcttaaatgcatttggatt
tcccatatccatgctgatcaccacgctggtttggctcgtatacttgctttaagacgtgat
ttgttgaaggaagtagagaatgaacccatactggttattgggccagagaaggttggagag
tttcttaaggagtatataaaattagaagatctagacatgttgttcctcgactgttggagc
actacgcggtctaagtgggataacatggaggctgaagacagttctctgcagccctgttcg
aaaaaattgaagccaagcactccacttgatgacatagcattgctaaagcatttaaggaaa
gttctcggtgaagcagggctagtgagactcatcagcttccctgttgtacactgtgatgac
gcgtttggtgttatcttggaatcagcagacagaatgaatcgaggggaagtagtaccgggt
tggaaggttgtgtactctggtgacacgaggccatgctcagaagttataaacgcatctctt
ggagcaacaattcttatacatgaggctacgttcgaggatggccttgtagaggaggccata
gcaagaaatcacagcacaatcaaggaagctctagaagtgggagattctgctggtgcatac
cgcgtaatattaactcacttcagccaaagatacccgaaagtacctgcacttgatgaagtg
agtatgcaaagaacttgtattgcttttgatctaatgagtgtaaacctagcagatttgcca
gtgctccctaaggttcttccctacctcaaattgcttttcagaaacaacggttaa
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