Solanum stenotomum: 125866163
Help
Entry
125866163 CDS
T08385
Name
(RefSeq) auxin response factor 1
KO
K14486
auxin response factor
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125866163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
125866163
NCBI-ProteinID:
XP_049402431
LinkDB
All DBs
Position
1:complement(8514199..8520566)
Genome browser
AA seq
654 aa
AA seq
DB search
MAHVAANHFGGGTHPGVSANGALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST
HQGVDQHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEQDQGEITSPDPPPPEP
EKCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSQQPPWQELVASDLHGNEWHF
RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSV
ISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLV
AATPTNTQPPQRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSPK
LSSAAKGLGYSENGSMPLSTKTMYWSSQSETCTESVAPASEKRPANGCRLFGIELRDCPT
IDESSSVAMPSAVMEDLPAPSLNVDSDRNSEPSNPIPSVSCEPEKSSLRSTHESQSKQIR
SCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEEMFEIEGELRGSTKKWQVVYTDNEDDMM
MVGDDPWHEFCSMVRKIYVYTAEEAKKLSPKIKLPVDDVKPVSDAGIVSNEEKA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgttgctgcaaatcatttcggtggcgggactcatccaggggtgtctgcaaat
ggtgcattatacaaggaactttggcatgcctgtgctggacctctcgtaacagttcctcgt
gaaggggaaagagtttattatttcccacagggtcacatggaacagcttgaagcatcgaca
caccagggagtagaccaacaccttccgtctttcaatttgccagctaaaattttatgcaaa
gtgatgaatgtccaacttcgggctgagtcagagacagatgaggtgtatgcacagataact
ctgcttcctgaacaagatcaaggcgagatcacaagccctgatcctcctccccctgaacct
gaaaagtgcactgtccattcgttttgcaagactcttactgcatctgatactagcacccat
ggtgggttttctgttctccgaaggcatgcagatgaatgtttgcctcaactggacatgtcg
caacaaccaccatggcaggaattggtcgctagtgatctacatggcaatgaatggcacttc
cgccacatttttcgaggtcaacctaggcgacacttgctcacaactgggtggagtgttttt
gtcagtgcaaagaagttggttgctggagatgctttcatctttctcaggggagacagtggg
gagcttagagttggtgttaggagactcatgagacagctaaataatatgccatcttctgtg
atttcaagtcacagtatgcatctgggtgttcttgcaactgcatctcatgccatctcaact
gggaccctcttctcggtgttctataagcctaggactagtcagtcagaattcattgtcagt
gtgaacaaatatcttgaagcacgaaatcacaagctttctgttgggatgaggtttaaaatg
agatttgagggtgaggaagttccagaaagaaggtttagtggaacaattgttggtgttggt
gataacccatcatctagatggcctgattctgaatggagatctttgaaggttcactgggat
gaaccatcgtcaattttgcgtccagatagggtttctccatgggatatggaaccacttgtc
gcagcaacacctacaaacacccagcctcctcaaagaaataagcgtgctcgaccgtcagtt
ttaccgtcgccagtgcaagaacttcctgctttaggaatgtggaagtctcctgtagattct
ccttcatcattctcgtactgtgatccgtctcgtgggcgagatctctacccttcacccaaa
ctttcttctgccgcaaagggcctgggttatagtgagaatggttccatgcctctttctacc
aaaacgatgtactggtcaagtcaatcggagacatgtacagagtctgttgcacctgctagt
gaaaagagaccggctaatggatgtaggttattcggaattgagttgcgggattgtccaacc
atagacgaatcctcatcggttgctatgccaagtgctgtaatggaggatctgccagctcca
tctttaaatgttgattctgaccgaaactccgaaccatcaaatccaattccttcagtaagt
tgtgagcctgaaaagtcatctctgaggtctacccatgagtctcaaagcaaacaaatccgg
agttgcactaaggtgcatatgcaagggaaggcagttgggagggcagttgatctcacaaga
ttagatagttatgaagatctgcttaagaaattggaggagatgttcgagattgaaggtgaa
cttcgtggatcaaccaagaaatggcaggtagtctacacagataacgaggacgacatgatg
atggttggagatgacccatggcatgaattctgcagcatggttagaaaaatttacgtctac
acagctgaggaagccaaaaaactttcaccaaagatcaaacttcctgttgacgacgtgaaa
ccagtttcagatgctggtatcgttagcaatgaggagaaagcatag
DBGET
integrated database retrieval system