Solanum stenotomum: 125866312
Help
Entry
125866312 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: sesquiterpene synthase 15b-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
125866312
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
125866312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
ZW10_C2
Motif
Other DBs
NCBI-GeneID:
125866312
NCBI-ProteinID:
XP_049402610
LinkDB
All DBs
Position
5:56767051..56772937
Genome browser
AA seq
552 aa
AA seq
DB search
MDGFGGESEITRRSDNHHPTVWGDHFLAYANLLGANEWEEKEHKGLKEEVTKMLVISPSK
SLQKVGLXNTIQLLGVAYHFEHEIEESLSEIYNGYEEWIGEFGKSHDLHVVALSFRLLRQ
QSYYVSSDVFRKFTEDQGNYNKALVNDMQGLLSLCEAAQFRVHDEEILDEAINFTTTHLK
LLLPKLSNSLSMQVSYALKYPINKTIARVATRKYISFFQEDKSCDQVILTFAKLDFNTLQ
KMHKRELCDITRWWKELDLANELPFARDRMVELYFWSLGVYFEPQYNVARNILTKVLCFV
SITDDIYDTYGTLHELTLLTNAIERWNINAAEKLAPYMKLFYTALLNFYNEVEKELAKEN
KSFRVNFAISEMKKLVRAYFQESKWYHGNTVPRMEEEYMKNGIESSTIPNLATTSWLGMG
DEATKEAFEWITTEPPILVASSIIGRLLNDIVSHEREIERGDVASGIDCYMNEYDATKEE
AYMEIRKIVENNWKDLNQRFLKPTTVPRVLLMPVLNLSRTSEFFYKDEDAYTSSKNNLKD
VISMMLVNPIKV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatggatttggtggtgagagcgaaattactcgtcgaagtgacaatcatcatcctact
gtttggggagaccattttcttgcctatgctaatctcttgggagccaatgaatgggaagag
aaggaacacaagggtctaaaagaagaagtgacaaaaatgctagtgatttctccttccaaa
tctttgcaaaaagttggacttnataacacaatccaattgcttggagtggcataccatttt
gaacatgagattgaggaatcattgagtgaaatctataatggttatgaagaatggattggt
gaatttggtaaaagtcatgaccttcatgttgttgctctaagctttcgattacttaggcaa
caaagttactatgtctcatctgatgtttttaggaagttcaccgaagaccaaggaaattat
aataaagcattggttaacgacatgcaaggattattaagcttatgcgaggcagcacaattc
agagtacatgatgaagaaattttggatgaagcaattaatttcaccaccactcatttgaag
ttattgttgcctaaattgagtaattctctatcgatgcaagtcagctatgccctaaagtat
ccaataaacaaaactatagccagggtagcaactagaaaatacatatcgtttttccaagaa
gataaatcttgtgatcaagtgatattaacttttgcaaaattggacttcaatacattgcag
aagatgcataaaagggagctatgtgatatcacaaggtggtggaaagagttggacttggca
aatgaattaccttttgcaagagatagaatggttgagttgtacttttggtctttgggtgtg
tactttgagccacaatataatgttgccaggaatatactaaccaaagtgttatgtttcgtt
tcaattaccgacgacatctatgatacctatggaacactgcatgaacttactctccttaca
aacgcaatagaaaggtggaacatcaacgctgcagaaaagctagcgccgtatatgaaactc
ttttacactgctctcctaaatttttacaatgaagtggagaaagagttggcaaaggagaac
aagtcatttcgagtcaactttgctattagtgagatgaaaaagttggtgagggcttatttt
caagagtcaaaatggtatcatgggaacacagtccccagaatggaggaggagtatatgaag
aatggaattgaaagtagcactatcccaaatcttgctacaacttcttggttaggcatgggc
gatgaagcaaccaaagaggcattcgaatggattacaactgaacctccaattcttgttgct
tcctctatcattggaagattgttaaatgatattgtatcacatgagagagaaatagaaaga
ggagatgtagcttcaggtattgattgttacatgaatgaatatgatgccacaaaggaagaa
gcttacatggagataaggaaaatagtagagaataattggaaggatttgaatcaacgattc
ctaaaaccaacaacagtaccaagagttcttctcatgccagtgcttaaccttagtaggacg
tcagaattcttttataaagatgaagatgcttatacttcttccaaaaataacttaaaagac
gtcatttctatgatgcttgttaatcccattaaagtatga
DBGET
integrated database retrieval system
